ggKbase home page

PLM1_30_b1_sep16_scaffold_1919_2

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 1258..1842

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator Tax=Frankia sp. QA3 RepID=I8QHD1_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 51.5
  • Coverage: 194.0
  • Bit_score: 175
  • Evalue 3.30e-41
Transcriptional regulator {ECO:0000313|EMBL:EIV91717.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.5
  • Coverage: 194.0
  • Bit_score: 175
  • Evalue 4.60e-41
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 48.7
  • Coverage: 193.0
  • Bit_score: 164
  • Evalue 1.60e-38

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Frankia sp. QA3 → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGGCCATAGCAGGCGCCCCGACCCGGCGCCGGGGCGACGCCCTGGAGCGGGCGATCTACGACGCCGTCTTCCACCAGCTCCAGACGGTCGGCTACAGCCGCCTGACCATGGAGGGCGTCGCCGGCTGTGCCCAGACCGGCAAGGCGGCCCTGTACCGCCGCTGGGCCGGCAAGGACGACCTGGTGGTCGACGCCATCGACCACGCCCTGCCGTCCCTGGCCGACCTGCCCGACCACGGCGACGTGCGCGAGGACCTGCTGGACCTGCTCCGGCGGATGGCGGCCATGGTCAACTCCCCCACCGGCTGCGCCCTGCAGTGCCTGCTGGCCCAGGCCGACCGTGACCACCAGTTCAGCGTCCTGCTCCACGAGCGGGTCCTGGCTCCCCGCAAGGGCAGCTTCCTGGCCGTGCTGCGGCGCGCCGCCGACCGGGGCCAGGTGCGGCCGGAGGCCGCCAGCCAGCTGGTGGCCGAGGTCGGCCTGGCCATGGTGGTGCAGCGCTTCCTGGTCGACGGCCCCCCGGTGCCCGACGACTACGTCGTGTCGGTGCTCGACGAGGTCGTCATGCCCCTGCTCCGCCTGTAG
PROTEIN sequence
Length: 195
MAIAGAPTRRRGDALERAIYDAVFHQLQTVGYSRLTMEGVAGCAQTGKAALYRRWAGKDDLVVDAIDHALPSLADLPDHGDVREDLLDLLRRMAAMVNSPTGCALQCLLAQADRDHQFSVLLHERVLAPRKGSFLAVLRRAADRGQVRPEAASQLVAEVGLAMVVQRFLVDGPPVPDDYVVSVLDEVVMPLLRL*