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PLM1_30_b1_sep16_scaffold_1919_5

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 2889..4112

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 Tax=Saccharopolyspora spinosa RepID=UPI0002378BC9 similarity UNIREF
DB: UNIREF100
  • Identity: 80.9
  • Coverage: 404.0
  • Bit_score: 643
  • Evalue 1.20e-181
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 80.4
  • Coverage: 408.0
  • Bit_score: 639
  • Evalue 6.20e-181
Putative RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB50888.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.4
  • Coverage: 408.0
  • Bit_score: 639
  • Evalue 3.10e-180

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Taxonomy

Conexibacter woesei → Conexibacter → Solirubrobacterales → Thermoleophilia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1224
GTGCCGGCCCTTCCCGCCGCCGAGATCGAGCGTGTCTTCCGCCAGGAGTACGGCCGGGCGGTCGCCGTCCTGGTCGGGGTCTTCGGTGACATCGACGTCGCCGAGGAGGCCGTCCAGGACGCGTTCGCCGCGGCCGTGCAGCGGTGGCCGTCGGCCGGCCTGCCCCCCAGCCCGGCCGGCTGGATCATCACCACCGCCCGCAACCGGGCCATCGACCGCCTCCGCCGGGAGGCGTCGCGGGAGGATCGCCACGCCCAGGCAGCCCTGGTCCACGCCCGCGGCGAGCCGGCCGAGGAGGGGCCCGTGCGCGACGACCGCCTGCGCCTGATCTTCACCTGCTGCCACCCCGCCCTCGGCACCGGCGTCCAGGTCGCCCTGACCCTGCGGCTGCTCGGCGGCCTGACCACGGCCGAGATCGCCCGGGCGTTCCTGGTCCCCGAGCCGACCATGGCCCAGCGCCTGGTCCGGGCCAAGGGCAAGATCCGCGACGCCGGGATCCCCTACCGGGTCCCGGACGAGGCCGACCTCCCCGACCGCCTCCGGGCCGTCCTGGCCGTCGTCTACCTGATCTTCAACGAGGGCTACGCCGCCAGCGCCGGCGACGCCCTGGTCCGCCGCGAGCTGTGCGCCGAGGCCATCCGCCTTGGGTGGCTGCTGGCCGAGCTGATGCCCGACGAGCCGGAGGTCATGGGCCTGCTCGCCCTGATGCTGCTGGTCGACGCGCGCCGGCCAGCCCGGACGACCCCGGACGGCCGGCTCGTGCTCCTGGCCGACCAGGACCGGGGCCGCTGGGACCGCGAGCGCATCGCCGAGGGCCAGGCCATCGTGCGCCGCTGCCTGCGCCGCAACCAGCCCGGCCCCTACCAGCTCCAGGCGGCCGTCAACGCCGTCCACAGCGACGCCCCGGCCGCCGCGGCCACCGACTGGCGGCAGATCCTGGCCCTGTACGACCAGCTGCTGGCCCTCACCCCGACCCCGGTGGTGGCCCTCAACCGCGCCGTCGCGGTGGCCGAGGTCGAGGGGCCGGAGGCGGCCCTGGCCCTGGTGGACGGGCTCGACCTGGACGGCTACCACCTGTTCCACGCCATCCGGGCCGACCTGCTGCGCCGCCTCGGCCGCGACGCCGAGGCCGCCCTGGCCTACGACGCCGCCATCGCCAGGGCCCAGAACGCGGCCGAGCTGGCCTTCCTGGAGGGCCGCCGCCGGACCGTGGCCGGGGCCTAG
PROTEIN sequence
Length: 408
VPALPAAEIERVFRQEYGRAVAVLVGVFGDIDVAEEAVQDAFAAAVQRWPSAGLPPSPAGWIITTARNRAIDRLRREASREDRHAQAALVHARGEPAEEGPVRDDRLRLIFTCCHPALGTGVQVALTLRLLGGLTTAEIARAFLVPEPTMAQRLVRAKGKIRDAGIPYRVPDEADLPDRLRAVLAVVYLIFNEGYAASAGDALVRRELCAEAIRLGWLLAELMPDEPEVMGLLALMLLVDARRPARTTPDGRLVLLADQDRGRWDRERIAEGQAIVRRCLRRNQPGPYQLQAAVNAVHSDAPAAAATDWRQILALYDQLLALTPTPVVALNRAVAVAEVEGPEAALALVDGLDLDGYHLFHAIRADLLRRLGRDAEAALAYDAAIARAQNAAELAFLEGRRRTVAGA*