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PLM1_30_b1_sep16_scaffold_682_4

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(1360..3177)

Top 3 Functional Annotations

Value Algorithm Source
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase {ECO:0000256|HAMAP-Rule:MF_01659}; Short=SEPHCHC synthase {ECO:0000256|HAMAP-Rule:MF_01659};; EC=2.2.1.9 {ECO:0000256|HAMAP-Rule:MF_01659};; Menaquinone biosynthesis protein MenD {ECO:0000256|HAMAP-Rule:MF_01659}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rapamycinicus NRRL 5491.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.6
  • Coverage: 609.0
  • Bit_score: 454
  • Evalue 2.10e-124
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase Tax=Nocardiopsis synnemataformans RepID=UPI00034D624F similarity UNIREF
DB: UNIREF100
  • Identity: 47.4
  • Coverage: 605.0
  • Bit_score: 468
  • Evalue 1.00e-128
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 48.6
  • Coverage: 609.0
  • Bit_score: 454
  • Evalue 4.20e-125

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Taxonomy

Streptomyces rapamycinicus → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1818
GTGAGCGGGGCGGGGCGGCGGTTCGCGCTGACGCTGGTCGACGAGCTGGCCAGGGCCGGGGTGACCGATGCCTGCCTGGCTCCGGGGTCGAGGTCGGCGCCGCTGGCGCTGGCCCTGGCGGAGCATCCGGGGATCAGGGTGCATGTGCACCTGGACGAGCGGTCGGCGGCGTTCTTCGCCCTTGGGGCGGCCAAGCGGTCGGGGCGGGCGGCGGTGGTGCTGTGCACCTCGGGGACGGCGGCGGCCAACTTCCACCCGGCGGTCCTTGAGGCCGACCTGGCCCGGGTCCCGCTGCTGGTGCTGACCGCGGACCGGCCGCCCGAGCTGCGCGGGACCGGGGCCAACCAGGCCACCGACCAGCTCAAGCTGTACGGGCCGGCGGTGCGGTGGTTCTGCGAGGCCGGCGTGCCCACCGACGAGCCGGGGGCCGGCCGCTACTGGCGCTCGCTGGCCAGCCGGGCGTGGGCCGAGGCGACCGGCCCCCCGGCCGGGCCGGTCCACCTCAACCTGGCCTTTGCCGACCCGCTGGTCCCGCCCGCGGCGGAGGGCGAGGCGCGGCTGGCCGGGGAGCCGGTGGAGGGCCGGGCCGGCGGCGCGCCGTGGACGGCCACGCCGGCCGGGATGCGGTCGGCGGCCCCCGGCGACGTGGCCGAGCTGGCCGAGGCGGTCCGGGCCAGCCCGAGGGGGCTGCTGGTCGCCGGGTGGGGGGCGGACCTGGATGCGGCGGCCGTCGACGCGTTCGCCGCCGCCAGCGGCTGGCCGGTGCTGGCCGACCCGCTGTCCGGGGCCCGCCGCGGCCCGGCCGCCATCTCCACCTACGACGGCCTGGTCCGGGCGCCCCGGTTCGCCGCCGCCCACCGGCCCAGCCTGGTCGTCCGGGTCGGCGGCGCCCCCACCAGCAAGGCCCTGACCGCCTGGCTGGACGGGTCCATCCCCCAGGTCCTGGTCGACCCCTCCGGCGGCTGGGCCGACCCGGCCCGCGTCGCCTCCCTCCGCCTCACCGCCGACCCCACGGGCCTGCTCGCCGCCACCGCCGCCCTCCTCACCGCCGACGGGCCGGGGCCGGGGAGCGGGGCCGGCGCCCGACCCACCGTGCGTGGCCGGCCCACCCCTGGTGCCGGGGTCACCCCCTTGGACGATCCCGCGAGCCCCTGGCTCGGGGAGTGGCTGGAGGCCGAACGGCTGGCTCGGGAGGCGATTGACGGGCTGCTGGACGACTGGGCGGAGCCGTTCGAGGGGCGGGTGGCCCGCGACCTGGTCGGCTGGGTGCCGGCCGGGGGGACCCTGGTGGTGGGGTCGAGCATGCCGGTGCGGGACGTGGACGCCTTCGCCCGGCCTCGGGAGGGGCTGCGGTATGTGGCCAACCGGGGGCTGTCGGGGATCGACGGGTTCGTGGCCACCTCGCTGGGGGTGGCGGCGGCCGGCGACGAGCCGGTGGTGGCGCTGTGTGGCGACCTGACCCTGCTGCACGACGCCTCCAGCCTGCTCGGGGCGGCGGGCCGGTCGCGGGGGGCGGTCCTGGTGGTGATCGACAACGACGGCGGTGGGATCTTCAGCTTCCTCCCCCAGGCCCAGCTCCCGGGCGACCTGTTCGAGCCCCTGTTCGGCACCCCGCACGGGCTGGACCTGACCGCCCTGGCCGCCGCCGCCCGGGTGCCGGCTCGGGTCGTCGAGAAGGCGGCCGACCTGGTCCCGGCCCTGGACGCCGCCCTGGCCGATGGCGGGACCCAGCTGGTGGTGGTCCGCAGCGACCGGGCGGCCAACCTGGCCCGCCACCGGGACGTGGCCGAGGCCGTGGCCGTCGCGGCCGGCGGGTAG
PROTEIN sequence
Length: 606
VSGAGRRFALTLVDELARAGVTDACLAPGSRSAPLALALAEHPGIRVHVHLDERSAAFFALGAAKRSGRAAVVLCTSGTAAANFHPAVLEADLARVPLLVLTADRPPELRGTGANQATDQLKLYGPAVRWFCEAGVPTDEPGAGRYWRSLASRAWAEATGPPAGPVHLNLAFADPLVPPAAEGEARLAGEPVEGRAGGAPWTATPAGMRSAAPGDVAELAEAVRASPRGLLVAGWGADLDAAAVDAFAAASGWPVLADPLSGARRGPAAISTYDGLVRAPRFAAAHRPSLVVRVGGAPTSKALTAWLDGSIPQVLVDPSGGWADPARVASLRLTADPTGLLAATAALLTADGPGPGSGAGARPTVRGRPTPGAGVTPLDDPASPWLGEWLEAERLAREAIDGLLDDWAEPFEGRVARDLVGWVPAGGTLVVGSSMPVRDVDAFARPREGLRYVANRGLSGIDGFVATSLGVAAAGDEPVVALCGDLTLLHDASSLLGAAGRSRGAVLVVIDNDGGGIFSFLPQAQLPGDLFEPLFGTPHGLDLTALAAAARVPARVVEKAADLVPALDAALADGGTQLVVVRSDRAANLARHRDVAEAVAVAAGG*