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PLM1_30_b1_sep16_scaffold_1626_9

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(8086..8952)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.5
  • Coverage: 291.0
  • Bit_score: 253
  • Evalue 2.60e-64
hypothetical protein Tax=Cellulomonas sp. JC225 RepID=UPI0002F440F2 similarity UNIREF
DB: UNIREF100
  • Identity: 52.5
  • Coverage: 299.0
  • Bit_score: 256
  • Evalue 1.70e-65
truB; tRNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 48.5
  • Coverage: 291.0
  • Bit_score: 253
  • Evalue 5.20e-65

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Taxonomy

Actinoplanes sp. N902-109 → Actinoplanes → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 867
GTGGACGGGGTGCTCGTCTGCGACAAGCCGGCGGGGCTGACCTCCCACGACGTCGTCGCCCGGGTGCGCCGCCTGGCCGGCCAGCGCCGGGTCGGCCACGGCGGCACCCTCGACCCGCCCGCCACCGGGGTCCTGGTCATGGCCCTCGGCCGGGCCACCCGGCTGCTGCCGTTCCTGCCCACCGAGCCCAAGCGCTACCTGGCCGAGGTCGCCTTCGGGGCCGAGACCGACACCCTGGACGCCGCCGGCACGGTCACCGCCACCGCCGCCGCCGACGGGGTCGACACCGAGCGCCTGCGAGCGGCCATGGCCGGCTTCCTCGGCCCCCAGGAGCAGGTCCCGCCGATGGTGTCGGCGATCAAGGTGGGCGGGGAACGCCTGTACGCCAAGGCCCGCCGGGGCGAGGAGGTCGAGCGGGCCCCCCGCCCGATCGTCATCCACGACCTGGAGCTGCTCGGGCTCGTCCACGGGGAGCGGCCGGTGGCCACCATCTCGGTGGTCTGCTCGGGCGGCACCTACGTCCGGTCGCTGGCCGCCGACCTCGGCCGGTCCCTTGGCACGCTGGCCCACCTGGCCAGCCTGCGCCGCACGGCCGTCGGCCGGTTCGCCGAGGCGGACGCCCACACCCTGGAGGAGCTGGCCGAGCCGGGGAGACTGGAGGCGGCCGTGCTCGACCCGGCGGCCGCGATGGCCTCGACGGCGACCCGGGCCCTGACCCCGGCCGAGGCGTCCGCCCTGGCCAACGGCCGCGCGCTCGACCCGACCGGCCACGGCGACCCGGTGGCCGCCTTGGGCCCGGACGGGCGCCTGGTCGCTGTCATCCAGGACAGCGCCGGCCGCGCCCGCCCCAAGGTGGTCCTGGCATGA
PROTEIN sequence
Length: 289
VDGVLVCDKPAGLTSHDVVARVRRLAGQRRVGHGGTLDPPATGVLVMALGRATRLLPFLPTEPKRYLAEVAFGAETDTLDAAGTVTATAAADGVDTERLRAAMAGFLGPQEQVPPMVSAIKVGGERLYAKARRGEEVERAPRPIVIHDLELLGLVHGERPVATISVVCSGGTYVRSLAADLGRSLGTLAHLASLRRTAVGRFAEADAHTLEELAEPGRLEAAVLDPAAAMASTATRALTPAEASALANGRALDPTGHGDPVAALGPDGRLVAVIQDSAGRARPKVVLA*