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PLM1_30_b1_sep16_scaffold_275_6

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 4800..5477

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Actinomycetospora chiangmaiensis RepID=UPI00037F6E34 similarity UNIREF
DB: UNIREF100
  • Identity: 64.7
  • Coverage: 221.0
  • Bit_score: 289
  • Evalue 1.80e-75
two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 65.8
  • Coverage: 225.0
  • Bit_score: 286
  • Evalue 4.30e-75
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABD11768.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain CcI3).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.8
  • Coverage: 225.0
  • Bit_score: 286
  • Evalue 2.10e-74

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Taxonomy

Frankia sp. CcI3 → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 678
ATGAGCATGCGAGTGCTGCTGGTCGAGGACGAGATCAAGATGTCCCGGGCCATCCGGCGTGGGCTCGAGCAGGAGGGCTACGCGGTCGACGCCGCGCTCGACGGCAACGACGGCCTGCACCGGGCCACCGAGTGGGACTACGACGCCATCGTGCTCGACATCCTGCTCCCCGGCCTGGACGGCATCGAGGTCTGCCGGCGGCTCCGCCTCGCCGGGCGCTGGGCGCCCGTGCTCATGCTCACCGCTCGCGACCGGGTGGCCGACCGGATCAGCGGCCTGGACGTCGGCGCCGACGACTACCTGGTCAAACCGTTCGCATTCGGGGAGCTGCTGGCCCGCCTGCGTGCCCTGGTCCGCCGGGGCGCCCGCGAGCGGCCGGCCGTCCTCACCGTCGGCGAACTGGTCCTGGACCCGGCCGCCCACGTCGTGAGCCTGTCGGGCCGCCCGGTGCTGCTGTCGGCCCGGGAGTTCGCCCTGCTCGAGTTCCTCATGCGCCGCCCCGGCCAGGTGGTCAGCCGTACCGAGATCCTCGAGCACGTCTGGAACTACAACTATGACGGCCTCTCCAACGTGGTCGACGTCTACGTCGGCTACCTGCGTCGCAAGCTCGAGCAGCCACCCGGCCTGGTGTGCATCCGCACCGTCCGGGGCGTCGGCTACGGGCTCGAGCCGGCGTAG
PROTEIN sequence
Length: 226
MSMRVLLVEDEIKMSRAIRRGLEQEGYAVDAALDGNDGLHRATEWDYDAIVLDILLPGLDGIEVCRRLRLAGRWAPVLMLTARDRVADRISGLDVGADDYLVKPFAFGELLARLRALVRRGARERPAVLTVGELVLDPAAHVVSLSGRPVLLSAREFALLEFLMRRPGQVVSRTEILEHVWNYNYDGLSNVVDVYVGYLRRKLEQPPGLVCIRTVRGVGYGLEPA*