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PLM1_30_b1_sep16_scaffold_3257_4

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(3600..4709)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S5 Tax=Mycobacterium avium subsp. paratuberculosis S5 RepID=L7DKM1_MYCPC similarity UNIREF
DB: UNIREF100
  • Identity: 32.4
  • Coverage: 364.0
  • Bit_score: 88
  • Evalue 1.00e-14
30S ribosomal protein S5 similarity KEGG
DB: KEGG
  • Identity: 28.9
  • Coverage: 432.0
  • Bit_score: 84
  • Evalue 4.10e-14
Uncharacterized protein {ECO:0000313|EMBL:EKC92909.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. SM8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.6
  • Coverage: 236.0
  • Bit_score: 69
  • Evalue 8.80e-09

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Taxonomy

Streptomyces sp. SM8 → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1110
GTGCTTGAACACCGGCGGGCCGCCGTAGGAGCGGGACAGGTCGACCGCGTCCAGCGGGAACCGGCCGGAGGGCGGCGGGTCGGGGAAGCGGACCGCCACCTTGCGACCCGACCTGCGCTCGGGGGTGAGGTTGGCCTTCATCTTCTCGACCCGGCGCTCGGTGACCATGGCCCGCCGGGCCATGTCCTCGTTCGAGTGCCGATACTTCTCCACGAAGGCCGAGAGCCGCTTGATGTCGCGCTCCAGGACCTTTCGGTGCTTGGCCTCGGACCGGGCCCGTACCTCGCTGGCGGCCAGGTACTGGGTCCAGGTGCCCTTGTAGGTCTCGATCGAGGCGGTGAGCGGGTCGAGCACCAGCACCCCGGTGACGTCGCGGTCCAGCAGGGGCAGGTCGTGGGAGACGAGCAGGATGCCCCCGTTGAAGTCGGCCAGGAACCCGGCCAGCCAGCGCTTGGCGTCGGCGTCCAGGTGGTTGGTGGGCTCGTCCAGGAGCAGGGTGGTCGCCTGGCTGAGCAGCACCCTGGCCAGCTCGACCCGGCGCCGCTCGCCACCCGACAGTCCCGACAGCGGCCGGTCGAGCCCGCTGGCCGGGATGCCGAGCCCGGCCGCGACCCGCCGCGCCTCGGCCTCGGCCCGGTAGCCACCCTCGGCCTCGAACCGCTCCTGGAGCCCGGAGAACCGCTTGATGGCCCGGTCGCGGGCCCGGTCGTCGGCGCTCTGGTCGATCCGTCGCCGGGCCTCCTCCAGCTCGTGGCGGGCCTGGTCCAGCCCGCGGGCCGACAGCAGCCGGGCCAGCCCGGTCGAGGCCGTGGTCGGCGGCGACTCCTGAGGCAGCCAGGCCAGCTCCCCGACCAGGGTGACGGCCGGGTGCCGCTTCGAGGTGGCCCGCTCACTCACCGACCGCAGCAGGCTCGTCTTGCCGGCCCCGTTGGGGCCGACCAGCCCGACCACGTCCCCGGGCGCGACCGTGAAGCTCGCCTCGGCGACGAGCAGACGGTGACCGACCTCGACGGTCAGATCGACAACGCGGAGCATGGCGAGCAGGTCCTCATCCGGGTACGGGTCCACCCCGATGATCGGCGTGCCCCCGCCAAACCCGCAACTGAATAG
PROTEIN sequence
Length: 370
VLEHRRAAVGAGQVDRVQREPAGGRRVGEADRHLATRPALGGEVGLHLLDPALGDHGPPGHVLVRVPILLHEGREPLDVALQDLSVLGLGPGPYLAGGQVLGPGALVGLDRGGERVEHQHPGDVAVQQGQVVGDEQDAPVEVGQEPGQPALGVGVQVVGGLVQEQGGRLAEQHPGQLDPAPLATRQSRQRPVEPAGRDAEPGRDPPRLGLGPVATLGLEPLLEPGEPLDGPVAGPVVGALVDPSPGLLQLVAGLVQPAGRQQPGQPGRGRGRRRLLRQPGQLPDQGDGRVPLRGGPLTHRPQQARLAGPVGADQPDHVPGRDREARLGDEQTVTDLDGQIDNAEHGEQVLIRVRVHPDDRRAPAKPATE*