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PLM1_30_b1_sep16_scaffold_3908_2

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(178..876)

Top 3 Functional Annotations

Value Algorithm Source
sdhB; succinate dehydrogenase iron-sulfur subunit (EC:1.3.5.1) similarity KEGG
DB: KEGG
  • Identity: 69.8
  • Coverage: 232.0
  • Bit_score: 362
  • Evalue 8.30e-98
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.4
  • Coverage: 231.0
  • Bit_score: 362
  • Evalue 2.40e-97
Succinate dehydrogenase subunit B Tax=Frankia sp. (strain CcI3) RepID=Q2JF80_FRASC similarity UNIREF
DB: UNIREF100
  • Identity: 69.8
  • Coverage: 232.0
  • Bit_score: 362
  • Evalue 2.90e-97

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Taxonomy

Frankia sp. CpI1-S → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 699
ATGCAGGTCACGCTGCGGGTGCGCCGGTTCAACCCCGAGACCGACAGCGAGTCGCGGATCGAGACCTACGACGTCCCGGCCGACCCGATGGACCGGGTGCTGGACCTGCTGCACTGGGTGAAGTGGAACGTCGACGGGTCGCTGACCTTCCGGCGCTCGTGCGCCCACGGCATCTGCGGGTCGGACGCCATGCTGATCAACGGCACCAACCGGCTGGCCTGCAAGGTGCTGGTCCGCGAGGTCGGCGACCAGATCACCGTCGAGCCGCTGCGGGGCCTGCCGGTGAACAAGGACCTGCTGGTCGACATGGAGCCGTTCTTCGCCTCCTACCGCGAGGTCCTGCCGTACCTGGTCAACGACGACCCGGCGCCCGACACCGAGCGGCGCCAGTCCCAGGGCGACCGGGAGCGCTTCGACGACACCACCAAGTGCATCCTGTGCGCCGCCTGCACCACCTCCTGCCCGGTGTTCTGGGCCGACGACGAGTACTTCGGCCCGGCGGCGATCGTCAACGCCCACCGCTTCATCTTCGACTCCCGCGACCAGGGGGCCGCCCGGCGCCTGACCGTGCTGAACGACAAGGAGGGCGTCTGGCGCTGCCGGACCACCTTCAACTGCACCGACGCCTGCCCCCGGGGCATCAAGGTCACCCAGGCCATCCAGGAAGTGAAACGGACCCTGCTGTTCCGCAAGGCCTGA
PROTEIN sequence
Length: 233
MQVTLRVRRFNPETDSESRIETYDVPADPMDRVLDLLHWVKWNVDGSLTFRRSCAHGICGSDAMLINGTNRLACKVLVREVGDQITVEPLRGLPVNKDLLVDMEPFFASYREVLPYLVNDDPAPDTERRQSQGDRERFDDTTKCILCAACTTSCPVFWADDEYFGPAAIVNAHRFIFDSRDQGAARRLTVLNDKEGVWRCRTTFNCTDACPRGIKVTQAIQEVKRTLLFRKA*