ggKbase home page

PLM1_30_b1_sep16_scaffold_4844_1

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(3..746)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y2N4_THEBD similarity UNIREF
DB: UNIREF100
  • Identity: 46.8
  • Coverage: 222.0
  • Bit_score: 187
  • Evalue 1.40e-44
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 46.8
  • Coverage: 222.0
  • Bit_score: 187
  • Evalue 3.90e-45
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ADG86845.1}; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.8
  • Coverage: 222.0
  • Bit_score: 187
  • Evalue 1.90e-44

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thermobispora bispora → Thermobispora → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 744
ATGGTGGTGGCGAGGCTGGTCGTGGACCGGTGGTTGCTCGAGCGCCGTCCCGCCCCCGATCTTGCCGACCGGCTCGTTTGCGTGTGGCGGGGAGACCTCGGCAAGGCAGCGATGCCGTTGCCCGATGAGCGCCTGGACCTGGTCTGGGTCGATGACGGGTCGCTGTGGCTGTCCGGACCGGAAACCACCTCGTGGTCGCGCGGCTATCGGCCAGGGACCACCGCCGTCGGGGTGGGCTTCAAACCAGGGGTCGGCCCGCCGATGCTCGGCCTGGCCGCGGCAGAGGTCCGCGACGCCCGGGTCCGCCTGGAGGAGCTGTGGGGGGATCGCCGGGCGCGCGAGCTGGCCGACCGCGTCGCGGCCCAGCCCGACGATGGTGGGCGGGCACGGGAGCTGGAGGGTGCCGTGCGGCGTCTGACTGCAAGGGCACGACCGGTCGACGGCGTGGCCTTTGAGGTGGCGGCCATGCTGAACCAGCCCCGCCCAGCCTCGGTGCTTGAGCTGGCCCGTGCCATCGGTCTCTCGGAGCGCCAGCTCCACCGTCGCTGCCTGGCGGCGTTCGGCTACGGGCCGGCGGTGCTGGCTCGGATCCTGCGGCTCCAGCGCGCCCTCCAGCTCGCCCGCTCCCACCAGGGGCCACTTCGGCTGGCCGCGCGGGCGGCCGCAGCCGGCTATTTCGACCAGCAGCACCTCGCCCCGCCAGCCCCGCCCGGGCGGGGCGGCACCCCGCCGCTGCCGCTGGAG
PROTEIN sequence
Length: 248
MVVARLVVDRWLLERRPAPDLADRLVCVWRGDLGKAAMPLPDERLDLVWVDDGSLWLSGPETTSWSRGYRPGTTAVGVGFKPGVGPPMLGLAAAEVRDARVRLEELWGDRRARELADRVAAQPDDGGRARELEGAVRRLTARARPVDGVAFEVAAMLNQPRPASVLELARAIGLSERQLHRRCLAAFGYGPAVLARILRLQRALQLARSHQGPLRLAARAAAAGYFDQQHLAPPAPPGRGGTPPLPLE