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PLM1_30_b1_sep16_scaffold_4710_4

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 2168..3058

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Amycolatopsis nigrescens RepID=UPI00037AF31A similarity UNIREF
DB: UNIREF100
  • Identity: 69.7
  • Coverage: 294.0
  • Bit_score: 398
  • Evalue 4.70e-108
RNA polymerase sigma 70 {ECO:0000313|EMBL:KJK55418.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.9
  • Coverage: 293.0
  • Bit_score: 388
  • Evalue 6.90e-105
RNA polymerase ECF-subfamily sigma factor similarity KEGG
DB: KEGG
  • Identity: 67.7
  • Coverage: 288.0
  • Bit_score: 380
  • Evalue 3.80e-103

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Taxonomy

Saccharothrix sp. ST-888 → Saccharothrix → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 891
ATGGACGAGAACGAGTGGCTGGCCGACCGCTTCGAGGACCACCGGGCCCATCTCCGGGCGGTGGCCTACCGGATGCTCGGCTCGCTCACCGAGGCCGACGACGCCGTCCAGGACACCTGGCTGCGGCTCAGCCGCTCCGGCGCAGACGGCGTCGAGAACCTCGGCGGGTGGTTGACCACGATCGTCGCCCGGGTCTGCCTGAACATGCTGCGGTCGCGCACCACCCGGCGCGAGGAGGCCCTCGGCGTCCACCTGCCCGATCCCGTCATCAGCCCTCCGGGCGTGCTCCAGCCCGACGAGGAGGCGGTGCTGGCCGACTCGGTCGGCCTCGCCCTCCTGGTCGTGCTCGACACCCTGTCACCGGCGGAGCGGCTCGCCTTCGTGCTCCACGACATGTTCCAGCTGCCCTTCGAGGAGATCGCTCCCATGGTCGGCCGGTCCCCTACGGCGGCCAGGCAGCTCGCCAGCCGGGCACGGCGGCGGGTCAAAGGGGCCGACCTCCCGGCCCCCGACCCCGACCTGGCTCGGCAACGCGACGTGGTCGACGCCTTCTTCCTGGCCGCCCGTGGCGGCGACCTCGACGCCCTCGTCGCGCTGCTCGACCCCGACGTCGTGCTGCGAGCCGACTTCGGGGCCAGGCGGCCCGCCGCCTCCCGGGTGGTCCGCGGCGCGGCGGCTGTCGCCAGGCAGGCGGTCCTGGGCGCGCTCCCAGGGGCCGACCTGCACCCCGCGCTGGTCAACGGCGCGGCCGGCGCGGTCGTGACGGTGGGTGGACGGCCGTTCGCGGTGCTGGGGTTCACCGTGGCCGAGGCCAAGATCCTGGAGATCGACGCCATCGCCGACCCCGACCGCGTCCGGGGGGTCGCCGCCGCCGTCCTGGGCGGCGGCTGA
PROTEIN sequence
Length: 297
MDENEWLADRFEDHRAHLRAVAYRMLGSLTEADDAVQDTWLRLSRSGADGVENLGGWLTTIVARVCLNMLRSRTTRREEALGVHLPDPVISPPGVLQPDEEAVLADSVGLALLVVLDTLSPAERLAFVLHDMFQLPFEEIAPMVGRSPTAARQLASRARRRVKGADLPAPDPDLARQRDVVDAFFLAARGGDLDALVALLDPDVVLRADFGARRPAASRVVRGAAAVARQAVLGALPGADLHPALVNGAAGAVVTVGGRPFAVLGFTVAEAKILEIDAIADPDRVRGVAAAVLGGG*