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PLM1_30_b1_sep16_scaffold_4932_7

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(4659..5426)

Top 3 Functional Annotations

Value Algorithm Source
transposase IS605 Tax=Actinomadura atramentaria RepID=UPI0003637E84 similarity UNIREF
DB: UNIREF100
  • Identity: 57.0
  • Coverage: 251.0
  • Bit_score: 285
  • Evalue 3.90e-74
Transposase {ECO:0000313|EMBL:ETA02417.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CcI6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.2
  • Coverage: 256.0
  • Bit_score: 276
  • Evalue 2.50e-71
Putative transposase in snaA-snaB intergenic region similarity KEGG
DB: KEGG
  • Identity: 55.5
  • Coverage: 254.0
  • Bit_score: 272
  • Evalue 9.60e-71

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Taxonomy

Frankia sp. CcI6 → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 768
CGCTGGTCGCGTCCCCTCCCGGCCGAGCCGTCCAGCGTCACCATCACTCTCGACCGTGCCGGCCGCTATCACGCTTCCTTCGTGGTGGAGGTGGCCGAGGTGCCATTGCCCGTCGCTGAGAGCGCGGTCGGGGTCGACCTTGGCCTTTCCAACTTCGCCGCTCTATCCACAGGTGAAAAGGTCGCCAACCCGCGATGGCTGCGACAACGGGAGAGGGCGCTGCGGCGTTCCCAGCGCAACATGGGCCGCAAGGAGAAGGGGTCGAGAAACCACGAGAAGGCCCGGCGCAAGCTGGCCCGCCAGCACGTGAAGGTCGCTGATGCGCGCCGGGACTTCCATCACCAGTTGAGCACCCGACTCGTCCGTGAGAACCAAGTGGTTGCTGTCGAGACGCTCAACCTCGCCGCCCTGGGGCGATCTAACTTGGCGAAGAGCCTCGCCGATGCTGGATGGGGTCAGTTCACCAGCATGCTGCGCTACAAGACGGCGATGGCTCAGCGGACCCTGGTCAAGGTCGACCGATGGTATCCCTCGTCCCAGCTATGCTCAGGCTGTGGTGCCAGGTCGGGGCCGAAAGGATGGACCGGCCTTCAGCTTCGCGCCTGGACCTGCTCCCAGTGCGCTATCGTGCATGACCGGGACGTCAATGCTGCGAAGAACATCCTGGCCGCTGGGCGGGCGGTCACTGCCTGTGGACCCGGTGTAAGGCCTGGCGTGAGCCAGGTGGTCGGGGATGAAGCAGGAACCACCCCCGCGGTCGCTGTTTGA
PROTEIN sequence
Length: 256
RWSRPLPAEPSSVTITLDRAGRYHASFVVEVAEVPLPVAESAVGVDLGLSNFAALSTGEKVANPRWLRQRERALRRSQRNMGRKEKGSRNHEKARRKLARQHVKVADARRDFHHQLSTRLVRENQVVAVETLNLAALGRSNLAKSLADAGWGQFTSMLRYKTAMAQRTLVKVDRWYPSSQLCSGCGARSGPKGWTGLQLRAWTCSQCAIVHDRDVNAAKNILAAGRAVTACGPGVRPGVSQVVGDEAGTTPAVAV*