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PLM1_30_b1_sep16_scaffold_5502_2

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(1653..2636)

Top 3 Functional Annotations

Value Algorithm Source
GAF domain-containing protein Tax=Frankia sp. QA3 RepID=I8QS33_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 40.2
  • Coverage: 229.0
  • Bit_score: 155
  • Evalue 5.90e-35
GAF domain-containing protein {ECO:0000313|EMBL:EIV95297.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.2
  • Coverage: 229.0
  • Bit_score: 155
  • Evalue 8.30e-35
transcriptional activator protein traR similarity KEGG
DB: KEGG
  • Identity: 38.9
  • Coverage: 229.0
  • Bit_score: 148
  • Evalue 2.70e-33

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Taxonomy

Frankia sp. QA3 → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 984
ATGCCCATCGATCCAGCCCTGCTGGCCAAGAGCATCGCCACCCTGACCGACCTGCATCCAGAGCGGGACCTGGCGGGCACGCTGGAGCAGGCCGTGGTCGCGGCCAAGCAGCTGTTCGAGGTCGACGCCGCCGGGATCATGCTCGGCGACGCCGACGGCCGGCTACGCTGGGCCAGCGCCTCGGACCCAGTCGCCCAGGCCCTAGAGGACAACCAGGAAACCTTCGCCGCCGGCCCCTGCCTGCAGGCCTTCGCCAGCGGCCAGCCAGCGGTCATCGGCGACGCCACGCTGGAGCCGCGGTGGGGGGAGATCACCTTGGCGTTGGTGGAGCTGGAGATCCGGTCCGCGCTCAGTGTCCCGGTGCAGCTGGGCGGGGGCCCGATCGGCACCTTGGATGTGTACGCGGCCGCCCCGGGAGGGTGGGATGCGACCGAGGTGAGCGCCTTGCAGACCTATGCCGGGCTGGTCGCGACCCTGTTGGGAACCGCGGCTAAGGTCGAGCGGAGCGGCCGGCTGGCCAGGCAACTCCAGGTCGCGTTGGAGGCTCGGAGCGTGCTCGAGCAGGCCAGGGCCGCGCTGTTGGAGCTGGAGCGGCTGGATGACCAGCAGGCCTTCATCGACCTGCGGCAGGCGGCCCGGTCCTCCCGACGCGAGCTTCCTGATGGGGTCGGCGAGCCGGTCGCCGGCTTGCCTCTGTCGTACGGCCGAGACGGGCCGGCTGGGACGGTTGATGGGTGGGTCCCGCAGCTGGACATGGGGACTCTGGACAGCGATGTCGCCGCCGTCCTGGAACGGGCGCCGGGCGCCGATGGAGTCGGGCACAAGTTGAGCCAGCTGCTGCTCGGCTTTCTCGCCACCGAGGTGGTGCCGCTGGCCGAACGGGTGGCCGAGCTCGGCATCAACCCCACCCCGCTGTTCGCGACAACTAGCGGCATCTTGCGGCTGTATGCCGACACCCTGGAACATCCCGAGCCTCACCGGTGA
PROTEIN sequence
Length: 328
MPIDPALLAKSIATLTDLHPERDLAGTLEQAVVAAKQLFEVDAAGIMLGDADGRLRWASASDPVAQALEDNQETFAAGPCLQAFASGQPAVIGDATLEPRWGEITLALVELEIRSALSVPVQLGGGPIGTLDVYAAAPGGWDATEVSALQTYAGLVATLLGTAAKVERSGRLARQLQVALEARSVLEQARAALLELERLDDQQAFIDLRQAARSSRRELPDGVGEPVAGLPLSYGRDGPAGTVDGWVPQLDMGTLDSDVAAVLERAPGADGVGHKLSQLLLGFLATEVVPLAERVAELGINPTPLFATTSGILRLYADTLEHPEPHR*