ggKbase home page

PLM1_30_b1_sep16_scaffold_5961_3

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(2180..2476)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator WhiB Tax=Candidatus Microthrix parvicella RN1 RepID=R4YWD0_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 53.8
  • Coverage: 78.0
  • Bit_score: 99
  • Evalue 1.20e-18
WhiB family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 60.0
  • Coverage: 80.0
  • Bit_score: 96
  • Evalue 2.80e-18
Tax=RBG_16_Actinobacteria_68_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 60.8
  • Coverage: 79.0
  • Bit_score: 102
  • Evalue 2.50e-19

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Actinobacteria_68_21_curated → Acidimicrobiia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 297
ATGGCCACGTCATCGGGCGCCGCGGCCGGCGGCCTGACATCCAGGGACCTCCAGATCGGCTGGCAGTACCGTGCCGCCTGCAAGGGCCCGGTCTCCAACCTGTTCTTCGCTCCCAACCACCTGGAGCGCAAGGAGGAGCGGCTGGCTCGCGAGTCCGCCGCCAAGGCGATCTGCCGCACCTGCCCGGTGCTGGCCGAGTGCCGCGAGTACGCCCTGCTGGTCCGCGAGCCCCACGGCATCTGGGGCGGGCTGAACGAGTACGAGCGCCGGCAGCTCCTGGCTCGCCGCGCCGGCTGA
PROTEIN sequence
Length: 99
MATSSGAAAGGLTSRDLQIGWQYRAACKGPVSNLFFAPNHLERKEERLARESAAKAICRTCPVLAECREYALLVREPHGIWGGLNEYERRQLLARRAG*