ggKbase home page

PLM1_30_b1_sep16_scaffold_6070_1

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 3..440

Top 3 Functional Annotations

Value Algorithm Source
Probable DNA repair protein VAB18032_06510 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FDR3_VERMA similarity UNIREF
DB: UNIREF100
  • Identity: 50.6
  • Coverage: 158.0
  • Bit_score: 150
  • Evalue 1.10e-33
Ku family containing protein similarity KEGG
DB: KEGG
  • Identity: 50.6
  • Coverage: 158.0
  • Bit_score: 150
  • Evalue 3.10e-34
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.6
  • Coverage: 158.0
  • Bit_score: 150
  • Evalue 1.50e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Verrucosispora maris → Verrucosispora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 438
GACGACGGCAAGGTCGCCCTGGCCAAGGTCGCCTTCCGCGACAAGGAGCACCTGGCCACCCTGCGGCTGCGCGACAACGTGTTCGTGCTGGAGACGATGTTCTGGCCGGACGAGATCCGCGTGCCCAAGTTCGACGTCCTGGACGAGTCGGTCGAGCTGCGGGCGCAGGAGATCCGTATGGCCCGCAGCCTGATCGACAGCCTCACCGACGCCTTCCAGCCCGAGGAGTTCCACGACGACTACCGGACGGCGCTCGAGGAACTGGTCCAGAAGAAGATCCAGGGTGAAGAGATCACCTATACCGAAGAGGCCGAACCGTCTAAGGTGGTCGACCTGATGGAGGCGCTCAAGGCGAGTGTCGAAGCGGCCAAGGCCGGTAAGCCGGCCCCGGACCGCAAGGCGAGCAGCCGAGGGCGCAAGAAGGCGGCAGGCGAGTAG
PROTEIN sequence
Length: 146
DDGKVALAKVAFRDKEHLATLRLRDNVFVLETMFWPDEIRVPKFDVLDESVELRAQEIRMARSLIDSLTDAFQPEEFHDDYRTALEELVQKKIQGEEITYTEEAEPSKVVDLMEALKASVEAAKAGKPAPDRKASSRGRKKAAGE*