ggKbase home page

PLM1_30_b1_sep16_scaffold_5779_1

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(1..492)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces natalensis ATCC 27448.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.0
  • Coverage: 153.0
  • Bit_score: 255
  • Evalue 5.00e-65
helicase Tax=Streptomyces vitaminophilus RepID=UPI0003653D8C similarity UNIREF
DB: UNIREF100
  • Identity: 82.4
  • Coverage: 153.0
  • Bit_score: 256
  • Evalue 9.40e-66
exodeoxyribonuclease V, alpha subunit similarity KEGG
DB: KEGG
  • Identity: 79.7
  • Coverage: 153.0
  • Bit_score: 254
  • Evalue 1.30e-65

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Streptomyces natalensis → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 492
ATGCCGCCGACTCACCAGACGCAACAGTGCCCGATTCAGGGGATCCGCCGCTATCTCGGCTCGGGGTTGATCAAGGGGATCGGCCCCAAGATGGCCGAGCGGATCGTGGAGCATTTCGGCCAGGCCACCTTGGAGGTGATCGAGCAGGCCCCAGGGCGGCTGGTCGAGGTGCCTGGCCTTGGCCCCAAGCGCACCGGCATGATCACGGCGGCGTGGGAGGAACAGAAGGCCATCAAGGAAGTGATGGTCTTCCTCCAGGGGGTGGGGGTGTCGACCTCACTAGCGGTACGGATCTACAAGACCTACCAGGACGAGGCGATCCAGGTGGTCCGCCGGGAACCGTACCGGCTGGCTGGTGACGTGTGGGGGATTGGGTTCAAGACCGCCGATCAGCTCGCCCAGCGCCTTGGGATTCCTCATGACAGCCCCCAGCGGGTCAAGGCTGGCCTGCAGTTCGCCCTGTCGCAGGCCAGCGACGACGGCCACTGCTAT
PROTEIN sequence
Length: 164
MPPTHQTQQCPIQGIRRYLGSGLIKGIGPKMAERIVEHFGQATLEVIEQAPGRLVEVPGLGPKRTGMITAAWEEQKAIKEVMVFLQGVGVSTSLAVRIYKTYQDEAIQVVRREPYRLAGDVWGIGFKTADQLAQRLGIPHDSPQRVKAGLQFALSQASDDGHCY