ggKbase home page

PLM1_30_b1_sep16_scaffold_5779_3

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 1349..2383

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Streptomyces sp. R1-NS-10 RepID=UPI00035FB773 similarity UNIREF
DB: UNIREF100
  • Identity: 70.8
  • Coverage: 342.0
  • Bit_score: 460
  • Evalue 1.20e-126
Transposase IS116/IS110/IS902 family protein {ECO:0000313|EMBL:EFC79783.1}; Flags: Fragment;; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.4
  • Coverage: 323.0
  • Bit_score: 422
  • Evalue 2.90e-115
IS110 family transposase similarity KEGG
DB: KEGG
  • Identity: 61.8
  • Coverage: 346.0
  • Bit_score: 410
  • Evalue 3.00e-112

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Frankia sp. EUN1f → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1035
ATGACCGTGGCCAGCATGCCGCACCCCCCGCAGTCCAGCCAGGCCGACGCTTGCGGCGAGGAGGTGGTTCTCGGGGTCGATACCCACAAGGACACCCACGTGGCCGCGGTGCTCACCACCATGGGCGCACTTGTGACCAGCCGCTGCTTCCCGACGACCGCCGCCGGCTACCAGCAGCTGCTCAGCTGGGCGCAGGCGGTGGGGACGCTGCGGCGGGCCGGGGTCGAATGCACCGGCTCCTATGGGGCCGGGCTAACCCGCCACCTGCGGACCGAAGGCGTGCAGGTCGTCGAAGTCAATCAGCCGGACAAGACCACCCGGCGCCGACGCGGCAAGACCGACGCCGTCGATGCCGAAGCCGCTGCCCGGGCGGTGCTCTGCGGCCGGGCCACCGCAACCGCCAAGACCGGCGACGGACCGGTGGAGATGGCCCGGATGTTCAAGCTGGCCAAGGACTCCGCGATCAAGTCCCGCACCCAGGCGATCAATCAACTCAAGGCCGTGCTGGTGTCCGCCGACCCAGCCCTGCGCGAGTCGCTGTCTGGGCTGAGCACAGCCAAGCTTATCCGCCGATGCGCCCAGCTCGACACCGGCGTGCCCACCGATGCCACCAGCGCCGCGGCCTGGACCCTGCGACTCCTCGCCCACCGGATTGTCGGCCTCACGGCCGAAGTCGGTGACCTCCAAACGCGGATCACCAACGCCGTCAATACCAGCACGCCCAGGCTCCTGGAACGCAACGGCGTCGGCCCCGACAGCGCCGCCACCCTGCTCATCACCGCCGGCGACAACCCCGAACGGCTCCACAGCGAAGCATCCTTCGCCGCGCTGTGCGGCTCCAGCCCGGTCGAGGCCTCCTCCGGCAAGACCCAACGCCGCCGCCTCAACCGAGGCGGCGACCGGCAAGCCAACGCCGCCCTGTATCGCATCGCCTTGTCCCGCCTCCGCTGGGACCCCCGCACCCGCGGCTACGTCGACCGACGCATCGCCGAAGGCAAAACCCCCCGCGAAGCGATCCGCTGCCTCATTGGTTGA
PROTEIN sequence
Length: 345
MTVASMPHPPQSSQADACGEEVVLGVDTHKDTHVAAVLTTMGALVTSRCFPTTAAGYQQLLSWAQAVGTLRRAGVECTGSYGAGLTRHLRTEGVQVVEVNQPDKTTRRRRGKTDAVDAEAAARAVLCGRATATAKTGDGPVEMARMFKLAKDSAIKSRTQAINQLKAVLVSADPALRESLSGLSTAKLIRRCAQLDTGVPTDATSAAAWTLRLLAHRIVGLTAEVGDLQTRITNAVNTSTPRLLERNGVGPDSAATLLITAGDNPERLHSEASFAALCGSSPVEASSGKTQRRRLNRGGDRQANAALYRIALSRLRWDPRTRGYVDRRIAEGKTPREAIRCLIG*