ggKbase home page

PLM1_30_b1_sep16_scaffold_6820_2

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(1443..1904)

Top 3 Functional Annotations

Value Algorithm Source
rpiA; ribose-5-phosphate isomerase A (EC:5.3.1.6) similarity KEGG
DB: KEGG
  • Identity: 38.5
  • Coverage: 117.0
  • Bit_score: 82
  • Evalue 8.40e-14
hypothetical protein Tax=Synechococcus sp. PCC 7336 RepID=UPI000345D741 similarity UNIREF
DB: UNIREF100
  • Identity: 40.8
  • Coverage: 120.0
  • Bit_score: 91
  • Evalue 4.90e-16
Ribose 5-phosphate isomerase {ECO:0000313|EMBL:AKH16044.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="'Deinococcus soli' Cha et al. 2014.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.9
  • Coverage: 116.0
  • Bit_score: 83
  • Evalue 1.90e-13

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

'Deinococcus soli' Cha et al. 2014 → Deinococcus → Deinococcales → Deinococci → Deinococcus-Thermus → Bacteria

Sequences

DNA sequence
Length: 462
ATGCTCGGTCTGGGCTCGGGTCGTGCTGTGTGGGCGCTCGTCGATACGCTCAAGGCCCGGTGGGCCGCGGGCCTGGTGGCTGCCGCAGATCGGTTCCTCGTCCTGGCCGAGCGGGCGAAGCTGGTCGGCCGACTCGGGGAGGGCATGCTCCTGAGGGTCAAGGTGGTGCGCTTCGCCTGGCCCAGACGCGACGGCGGCTCCTTGGGGGTCGTGCCGGAGGCGACGCTGCGGCTCGGCGACGACCGCACTCCCATCGTCACCGACGAGAACCACTACCTACTCGACTGCGTGGTGCCTGTAGGACGCGACCTGGTGGAGCTCTCAGGGCCGTTCAAGGCAACGCTTGGCGTGGTGGAGCACGGGCTCTTTCTCGGCATGGCCGATCAGGCCTTCCTGGGAACCCCGGAGGGCCGTGTCCAGACGCTGTCCAGGCGAGTGGGGGCCGCCCCGAGAATGGAGTAG
PROTEIN sequence
Length: 154
MLGLGSGRAVWALVDTLKARWAAGLVAAADRFLVLAERAKLVGRLGEGMLLRVKVVRFAWPRRDGGSLGVVPEATLRLGDDRTPIVTDENHYLLDCVVPVGRDLVELSGPFKATLGVVEHGLFLGMADQAFLGTPEGRVQTLSRRVGAAPRME*