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PLM1_30_b1_sep16_scaffold_6565_4

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(2704..3273)

Top 3 Functional Annotations

Value Algorithm Source
Probable transposase Tax=Rhodococcus sp. (strain RHA1) RepID=Q0RWJ4_RHOSR similarity UNIREF
DB: UNIREF100
  • Identity: 50.8
  • Coverage: 183.0
  • Bit_score: 191
  • Evalue 4.30e-46
Endonuclease DDE {ECO:0000313|EMBL:EYU68700.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PCS3-D2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.7
  • Coverage: 188.0
  • Bit_score: 198
  • Evalue 4.90e-48
transposase similarity KEGG
DB: KEGG
  • Identity: 50.8
  • Coverage: 183.0
  • Bit_score: 191
  • Evalue 1.20e-46

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Taxonomy

Streptomyces sp. PCS3-D2 → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 570
GTGACCGGCGACACCGTCTACGGCGGCGACCGCCGCCTGCGCGTGTGGCTGGAATCCCACGCCATCCGACACGTCATGGCGGTCAAGTGCACCGAGCCGCTGTGGATGATGACCGAGCACGGCCCCGGACAGGTCGCTGCCCAAGACCTGATCGCCCGAGTGCCTGCCGAGCAGTGGCTGCGCATCAACGCCGGAGATGGCAGCAAAGGCAAGCGCTTCTACGACTGGACCAGGGTGCCGCTGTGGCGGCCGGGCTGGCCCGCCAACGTGGGGTTCTGGCTGCTGGCCCGCCGCAAGATCAGTGACCCTGGGGAGCTGGCCTACTACGTCTGCTTCGCCCCCGCCGACACCTCGCTGGTCACCCTGGTCCGGGTCGCGGGCTGCCGGTGGCGGGTCGAGGAGGCCTTCGAGCAGGCCAAGGGCGAAGTCGGTCTCGATCACTACCAAGTCCGCCAGTATCCGGCCTGGTACCGGCACATCACCCTGGCCATGGCGGCGCTGGCGTTCCTGGCCGCCACCCGCGCCCGCCTGCCCGACGGCGCCGACGGGCTCGGGGGGCGGTCGTGGTGA
PROTEIN sequence
Length: 190
VTGDTVYGGDRRLRVWLESHAIRHVMAVKCTEPLWMMTEHGPGQVAAQDLIARVPAEQWLRINAGDGSKGKRFYDWTRVPLWRPGWPANVGFWLLARRKISDPGELAYYVCFAPADTSLVTLVRVAGCRWRVEEAFEQAKGEVGLDHYQVRQYPAWYRHITLAMAALAFLAATRARLPDGADGLGGRSW*