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PLM1_30_b1_sep16_scaffold_7513_4

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(2854..3066)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NN17_ROSCS similarity UNIREF
DB: UNIREF100
  • Identity: 61.5
  • Coverage: 65.0
  • Bit_score: 77
  • Evalue 3.40e-12
RpoD family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 61.5
  • Coverage: 65.0
  • Bit_score: 77
  • Evalue 9.50e-13
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.5
  • Coverage: 65.0
  • Bit_score: 77
  • Evalue 4.70e-12

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Taxonomy

Roseiflexus castenholzii → Roseiflexus → Chloroflexales → Chloroflexia → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 213
CTCGAGCAGGTCCTGAACGCGCTGCCGGAGCGGGAGCGTCAGGTGCTGATCCTGCGCTTTGGGCTGGACTCGGGCACGCCCCGGACCTTGGAGGAGGTCGGCGCGGTCATGGGCTTCTCCCGCGAGCGCGCCCGCCAGGTCGAGCGCGACGCCCTGGCCGCCCTGCGCCGCCCCGAGGTCCGCGCCCGCCTCGACCTCGACGGGGCCGCCTGA
PROTEIN sequence
Length: 71
LEQVLNALPERERQVLILRFGLDSGTPRTLEEVGAVMGFSRERARQVERDALAALRRPEVRARLDLDGAA*