ggKbase home page

PLM1_30_b1_sep16_scaffold_8103_3

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 1733..2758

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix, AraC domain protein Tax=Frankia sp. CN3 RepID=G6HC25_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 82.2
  • Coverage: 191.0
  • Bit_score: 315
  • Evalue 6.10e-83
Transcriptional regulator, AraC family similarity KEGG
DB: KEGG
  • Identity: 72.2
  • Coverage: 212.0
  • Bit_score: 293
  • Evalue 4.10e-77
Transcriptional regulator, AraC family {ECO:0000313|EMBL:CCH33985.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.2
  • Coverage: 212.0
  • Bit_score: 293
  • Evalue 2.00e-76

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Saccharothrix espanaensis → Saccharothrix → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1026
ATGTCCGCGGCCGGGCGCCCGTCAGGGATCGGCGCCGGCTCGATGCTGGCGGCAGCGCGGCCGGACCATTCCGGCGCGCGATGCCGGCGGGGCGTCGGCGATACTGTGGGCGTGGAGTACGTGTCCAGAGTGCCGCGACCGCCGCTGGACGGGCTGATCGACGACCTTTACTACTTGGAGGGTGTGCCGCCGTACGCCCGGTTGACGCTGCCGCCGATGCCGTCGGCGCTGCTCATCGTCAACCTCGGTTCGCCGTTCCTCATTCGTGCCGGCACCGACGTCGAGACGGCCGAGTACGCCGACGGCTGCGTGGTCACCACGCCCACCCGCGCGTTGGAGTTCGGCTACCCACTCCGGACCCGGTCCGTCGGCGTGCACTTCAAGCCGTGGGGGCTGGCGCCGTTCCTGCCGATGCCCGCGGCCGAGCTGTGTGACCGGCCGGTGACGGTAGAGCAGGTTTGGGGCCGGCCCGCCATTGCTGAGCTGCGAGACCGGCTGGCCACGGCGGACGGACCGCACGAGATGCTGACGCTGCTCGAGGAGGAGCTACAGTTACTGGAGCGCGCCATGACGCGATGGCTGGCGCAGCTGCCGGACGAGTTGGCTGCGGGTGTCGACCCGCGCGGCTCGGCGCGCGAGCGCGGCGACCAGGTAGCCGCGGTGCTCAGCGCCTCCCTCGCCCGCCAGACGATGTTGTGCGATCTCATCAACGCACAGACCAACGTGCTGGAGCACAACGTGTCCGTCGAGGTCGTCGTGCAGCACAAGCGGTCCGCCATCGCCGGTATCGCGACCGCATCCGACCTCGTCCGCCGGCACGTGCCGGAACTCGGCGACGGCGCCCGACCCGTGTCGATGACCACGTTGATCCTCGCCGGTGCCCTGTCGAGCTACTGCCGGCCGTCGGCCAGCGCGCTCGCCGCCTACGAGGCCGACCCCACCGTGCTCGAACTCCGCCTGGACCTGCGCACCGCACTGGAGAGCGCCGTCGCCACGCTGATCGCAGGCACTCTGGCACGGTCCTGA
PROTEIN sequence
Length: 342
MSAAGRPSGIGAGSMLAAARPDHSGARCRRGVGDTVGVEYVSRVPRPPLDGLIDDLYYLEGVPPYARLTLPPMPSALLIVNLGSPFLIRAGTDVETAEYADGCVVTTPTRALEFGYPLRTRSVGVHFKPWGLAPFLPMPAAELCDRPVTVEQVWGRPAIAELRDRLATADGPHEMLTLLEEELQLLERAMTRWLAQLPDELAAGVDPRGSARERGDQVAAVLSASLARQTMLCDLINAQTNVLEHNVSVEVVVQHKRSAIAGIATASDLVRRHVPELGDGARPVSMTTLILAGALSSYCRPSASALAAYEADPTVLELRLDLRTALESAVATLIAGTLARS*