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PLM1_30_b1_sep16_scaffold_8396_1

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(419..1492)

Top 3 Functional Annotations

Value Algorithm Source
Integrase catalytic region Tax=Frankia sp. (strain EAN1pec) RepID=A8KXN2_FRASN similarity UNIREF
DB: UNIREF100
  • Identity: 57.7
  • Coverage: 359.0
  • Bit_score: 412
  • Evalue 3.80e-112
integrase catalytic subunit similarity KEGG
DB: KEGG
  • Identity: 57.7
  • Coverage: 359.0
  • Bit_score: 412
  • Evalue 1.10e-112
Integrase catalytic region {ECO:0000313|EMBL:ABW12816.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.7
  • Coverage: 359.0
  • Bit_score: 412
  • Evalue 5.40e-112

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Taxonomy

Frankia sp. EAN1pec → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1074
GTGCTGTCGAAGCTCGCCTACCTGCCGCTCTGCCGCTCTGTTCTGCTGCTCACCCAGCTCGCCCGTGGCGACGCCGCCAAAGATCTCGAGATCCTCGTCCTGCGCCACCAGCTCATCGTCCTGCGCCGCCAGACGCCGCGACCCAGGCTGGAGCCTGCCGACCGGGCCCTGCTCGCGGCGATCAGCCGCGTCCTGCCCCGGACCCGCTGGTCGTGCTTCTTCGTCAAGCCCGAGACGCTGCTGCGCTGGCACCGGCGCATGGTCGCCGGCGCCTGGACCTACCCACGCCGCGGACCAGGACGACCGCCGATGGACCACGACGTTCAGCAGCTGATCCTCCGGCTGGCCAGGGAGAACCCGCGCTGGGGATACCAACGCATCAAGGGCGAACTCCTACGCCTGGGGACCCAGGCCTCGGCAACCGCGATCCGGACGCTACTGCGCCATCACGGGTTGGACCCAGCCCCGCACCGAGCGGCCACGACGTGGCAGGCGTTCCTGCGCCAGCAGGCCGCCGGGATCGTTGCGTGCGACTTCTTCACCGTCGACACGGTCTTGCTGTGGCGGCTGTACGTGCTGTTCTTCATCGAACTGGATACCCGCCGGGTCCACCTGGCCGGGGTGACCCCGAACCCCAACGCCGCCTGGGTCACCCAGCAAGCCCGCAACCTGCTACTTACGCTCGGGGAACGAGGACGCCGGATGCGCTTCCTCATCCGCGATCGTGACGCGAAGTTCTGCCGCGGGTTCGACGACGTGTTCTGTTCGGCGGGCGCCGAGGTGCTGCTGACGCCGGTGCAGGCACCCAACGCGAACGCCTACGCGGAGCGCTGGATTCGGACGGTGCGCGCCGAGTGCCTGGACTGGCTGCTGATCGTGAGTCGCCGTCATCTGGCGCAGGTCCTGCGGGTCTACGTTGCGCACTACAACGCCCACCGCCCCCACCGAGCGCTTGGTCTGGAGCCGCCCGATCCATCGGCCAATCCGACCGTCATCAGCGGGGATCGGCACCGTGTGCACCGGCGGGATCGGCTCGGCGGTCTGCTCCACGAGTACCACCGACAAGCTGCATAA
PROTEIN sequence
Length: 358
VLSKLAYLPLCRSVLLLTQLARGDAAKDLEILVLRHQLIVLRRQTPRPRLEPADRALLAAISRVLPRTRWSCFFVKPETLLRWHRRMVAGAWTYPRRGPGRPPMDHDVQQLILRLARENPRWGYQRIKGELLRLGTQASATAIRTLLRHHGLDPAPHRAATTWQAFLRQQAAGIVACDFFTVDTVLLWRLYVLFFIELDTRRVHLAGVTPNPNAAWVTQQARNLLLTLGERGRRMRFLIRDRDAKFCRGFDDVFCSAGAEVLLTPVQAPNANAYAERWIRTVRAECLDWLLIVSRRHLAQVLRVYVAHYNAHRPHRALGLEPPDPSANPTVISGDRHRVHRRDRLGGLLHEYHRQAA*