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PLM1_30_b1_sep16_scaffold_8894_2

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(254..1267)

Top 3 Functional Annotations

Value Algorithm Source
PDZ/DHR/GLGF domain protein Tax=Frankia sp. CN3 RepID=G6HHZ1_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 60.5
  • Coverage: 324.0
  • Bit_score: 363
  • Evalue 1.50e-97
peptidase S1 and S6 chymotrypsin/Hap similarity KEGG
DB: KEGG
  • Identity: 58.1
  • Coverage: 327.0
  • Bit_score: 353
  • Evalue 5.60e-95
Peptidase S1 and S6 chymotrypsin/Hap {ECO:0000313|EMBL:ADP80325.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.1
  • Coverage: 327.0
  • Bit_score: 353
  • Evalue 2.80e-94

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Taxonomy

Frankia sp. EuI1c → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1014
ATGAGCTCCATCCAGTTCGTCGACGCGTTGCTGGCCGATGCCGACCGCGACCAGCGGGCCGACCCCGGCCCGTCCGACGAGGAGGCGCTCGACGCCTACTCCAAGGTGGTCTCCGGGGTCGCCGAGCGCGTGATCGGCTCGGTGGCCAGCCTGCGGATCAGCCGCCGGCTGTCCGGGGGGCGCCAGGCGCAGGGCTCCGGCTCGGCGGCGGCGATCACCCCGGACGGCTTCCTGGTCACCTCGGCCCACGTGGTCGAGGGGGCCGACAAGGGCCGGGCCTCGATGGCCGACGGCCGCGAGCTGCGGTTCGAGGTCGTCGGCCGCGACGCGCTGTCCGACCTGGCGGTGATCCGGGCGAGCGGGGCCGACCTGGAGCCGGTGTCCCTGGGGAACGCCGACCGGCTCCGGGTCGGCCAGCTCGTGGTGGCCGTCGGCAACCCGATGGGGCTGGCCGGCTCGGTCACCGCCGGGGTGGTCAGCGCGCTCGGCCGCTCCTTCCCGACCAGCGACGGCCGGGCCAGCCGGCTGGTCGAGAACGTCATCCAGACCGACGCCGCCCTCAACCCGGGCAACTCCGGCGGCGCCCTGGTCGACGGGCGCGGCCGCATGGTCGGGGTCAACACCGCCGTGGCCGGGATCGGCCTCGGCCTGGCCGTGCCGGTCAACGCCACCACCCGGCGGATCATCGCCGCCCTGATGCGCGACGGCCGCTTCCGCCGGGCCTTCATCGGCATCGCCGGCGGGAGCCGCCCGCTCCCCCCGCGGGTCGCCCAGGTGCTGGACCGCACCGCCGGGGTCGAGGTCGTCCAGGTCGTCGACGGCAGCCCCGCCGCCCGGGCCGGCCTGCGCAACGAGGACCTGATCATCGACCTCGACGGCGCTCCCGTCGCCGACGCCGGCGACCTCCAGCGCCTGATGGTGGGCGAGCGCATCGGCCGCCCCCTCCCCGTCCGGGCCTTCCGCGGCGGCGAGCTGCTCGAGCTGACCGTGGTCCCAGTCGAGCTCCAGCACTAG
PROTEIN sequence
Length: 338
MSSIQFVDALLADADRDQRADPGPSDEEALDAYSKVVSGVAERVIGSVASLRISRRLSGGRQAQGSGSAAAITPDGFLVTSAHVVEGADKGRASMADGRELRFEVVGRDALSDLAVIRASGADLEPVSLGNADRLRVGQLVVAVGNPMGLAGSVTAGVVSALGRSFPTSDGRASRLVENVIQTDAALNPGNSGGALVDGRGRMVGVNTAVAGIGLGLAVPVNATTRRIIAALMRDGRFRRAFIGIAGGSRPLPPRVAQVLDRTAGVEVVQVVDGSPAARAGLRNEDLIIDLDGAPVADAGDLQRLMVGERIGRPLPVRAFRGGELLELTVVPVELQH*