ggKbase home page

PLM1_30_b1_sep16_scaffold_10932_2

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 439..1848

Top 3 Functional Annotations

Value Algorithm Source
Transposase, IS605 OrfB family Tax=Mycobacterium tusciae JS617 RepID=H1K5Y6_9MYCO similarity UNIREF
DB: UNIREF100
  • Identity: 52.8
  • Coverage: 468.0
  • Bit_score: 466
  • Evalue 2.20e-128
Transposase {ECO:0000313|EMBL:CDP84572.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium farcinogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.6
  • Coverage: 468.0
  • Bit_score: 461
  • Evalue 1.30e-126
transposase similarity KEGG
DB: KEGG
  • Identity: 38.9
  • Coverage: 396.0
  • Bit_score: 266
  • Evalue 7.40e-69

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mycobacterium farcinogenes → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1410
ATGCTCGTCCGACACGCTGGGGCGTCGAGGTTCGCCTTCAACGAGTGCCATCGGCTGGTCACCGACGCCCTCGCCGCCAAACAGACGGACCCTCAGGTCAAAGGGCCTTGGTCGGGATTCGACCTCATCAACGCTTACAACGCCTGGAAGGGCAGCGAGGCCGCCGGACGCGTCTTCGTTGTCGCTCGCGACGGTGCCACTACCAAGAAGGTCACCGGCCTAGCCTGGCGGCATGACGTATCGGCGCAAGTCTTTGAGGAGGCCGCAGTAGACCTCGGTCACGCCTTGGCGGCCTACGGGCGGGCCAAGCTTGGCAAGAACAAGGGCCAGCGGGTTGGCTTCCCCAGACGCAAGCGCAAGGGCCGCTGCCGCGACAGCTTCCGGCTCCGCAACAAGCAGAACCGGAGCGGCACCTCGGTGATCCGGATCGGCGAGCGACATCCCCGCAGTGTCACCTTGCCGAAGATCGGCACGATCCGCGTGCACGACGACACCCGCCGGCTTCGGCGGCTCCTCCACCCAATCGACCAGATCGACCCCGACACTGGCCAGCTGAAGGTCGCGCCGCTGGCCAGGATTCTGTTCATCACCTGTAGCCGTCACGGCTCCCGGTGGTACATCAGCCTGAATGTCAGGGCCCCCGGGTTTCACCCGGAGCGCCGCCACCAACCTCGCCTCAACGATGACTCGAGCGGATTCGTCGGGGTGGACCGCGGCCTTGCCGCGTTTGCCGTAGCGGCCACTGCCCAAGGGACGGAGGTCGGCCGCTACCATGCGCCCAAGCCCCTCCAACACAATCTGGCGGGCCTACGGCGGCGGTCCCGAGCGGCATCTCGTACCAAGCCCAGCTCCCGCAATCATGTGAAGGCGATCCGCCGACTGTCCCGACAACATGCCCGCATCAGCAGGGTTCGCCGAAGCTTCCTGCATGAGGTCTCCAGCCAGCTCGTCAAGACTCACGACCGGCTGTGTCTGGAAGGCCTTGCCATCGCCAACCTCGTCCGCAACAAGCACCTGGCCCGTGCCATCGGCGACGCCGCCTGGGCCGAGTTCGCTCGCCAGGTCGGCTACAAAGCCGCCTGGTTCGGCGCCGAGCTGGTGGTAGCCGACCGATGGTTTCCATCAACCAAGACCTGCTCACGCTGCGGGAAGGTCAACCAAGAGGTGCGGCTGACCGAGCGAGTCTTCCGTTGCAGCCGTTGCGGGCTGGTCATCGACCGAGACCGCAATGCCGCCACCAATCTCGCCACCTGGGCCCAGGCCGCCCAGATGGCTATCCGGGCCCCGGCCCGCCAAGCGGGCGGCCGGGTCACCAATGCCCCTGGAGGGGAAGGCGCTGGCCGTCGCTCTGGCGATGGTGAAACCGGCTCCGATGAAGGGGGAACCGACGCGCACGCCTTCGTGGTGTGA
PROTEIN sequence
Length: 470
MLVRHAGASRFAFNECHRLVTDALAAKQTDPQVKGPWSGFDLINAYNAWKGSEAAGRVFVVARDGATTKKVTGLAWRHDVSAQVFEEAAVDLGHALAAYGRAKLGKNKGQRVGFPRRKRKGRCRDSFRLRNKQNRSGTSVIRIGERHPRSVTLPKIGTIRVHDDTRRLRRLLHPIDQIDPDTGQLKVAPLARILFITCSRHGSRWYISLNVRAPGFHPERRHQPRLNDDSSGFVGVDRGLAAFAVAATAQGTEVGRYHAPKPLQHNLAGLRRRSRAASRTKPSSRNHVKAIRRLSRQHARISRVRRSFLHEVSSQLVKTHDRLCLEGLAIANLVRNKHLARAIGDAAWAEFARQVGYKAAWFGAELVVADRWFPSTKTCSRCGKVNQEVRLTERVFRCSRCGLVIDRDRNAATNLATWAQAAQMAIRAPARQAGGRVTNAPGGEGAGRRSGDGETGSDEGGTDAHAFVV*