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PLM1_30_b1_sep16_scaffold_10259_3

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 908..1486

Top 3 Functional Annotations

Value Algorithm Source
Integrase catalytic region Tax=Frankia sp. CN3 RepID=G6H3B5_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 54.5
  • Coverage: 154.0
  • Bit_score: 154
  • Evalue 5.90e-35
integrase catalytic subunit similarity KEGG
DB: KEGG
  • Identity: 42.2
  • Coverage: 199.0
  • Bit_score: 144
  • Evalue 3.00e-32
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 48.2
  • Coverage: 168.0
  • Bit_score: 153
  • Evalue 2.40e-34

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Taxonomy

RBG_19FT_COMBO_Actinobacteria_70_19_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 579
GTGGCCTGCGACTTCTTCACCGTCGACACCATCTGGCGGCGACGGCTGTATGTGCTGTGCTTCATCGAACTTGACACCCGATGCGTCTACTTGGCCGGCGTGACTGCCCACCCCGACGGTCGCTGGGTCACCCAGCAGGCCCGCAACCTGTTGCTGATCCTGGGCGGGCGGGGACGACGGGTGCGGTTAGTGCTGCGCGACCACGACACGAAGTTCTCCCACGGCTTGGACGACGTGGTCCGCTCCCGGGGTGGGGACGTGCTGGTGGCACCGGTCCGGGCGCCCAAGGCGAACGCGTACGCGGAGCGCTGGGTCCGCACAGTCCGTACCGAGTGCCTGGACTGGCTGCTGATCGTCGGCCGAGGCCACCTGGACCATCCTCGGGCAGGATCATCGAGGCACTGTGCGTCGACGCGACCTGCTCGGTGGTCTGCTCCACGAGTACCGGCGAGCTGCATGAACGCCTTCGCGCACCTTTCAGTCCACCGTACCGAGCCCGCGTCCTGCGAAGCCCCGACTCAGCGGCCACGTCCAAGTTACCTAGCCCACACGCATGCCTTGCGATCACGCAACGCATGA
PROTEIN sequence
Length: 193
VACDFFTVDTIWRRRLYVLCFIELDTRCVYLAGVTAHPDGRWVTQQARNLLLILGGRGRRVRLVLRDHDTKFSHGLDDVVRSRGGDVLVAPVRAPKANAYAERWVRTVRTECLDWLLIVGRGHLDHPRAGSSRHCASTRPARWSAPRVPASCMNAFAHLSVHRTEPASCEAPTQRPRPSYLAHTHALRSRNA*