ggKbase home page

PLM1_30_b1_sep16_scaffold_10264_1

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 2..523

Top 3 Functional Annotations

Value Algorithm Source
Putative glycine betaine/choline-binding (Lipo) protein of an ABC-type transport system (Osmoprotectant binding protein) Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RQM5_BLASD similarity UNIREF
DB: UNIREF100
  • Identity: 52.4
  • Coverage: 166.0
  • Bit_score: 169
  • Evalue 2.10e-39
putative glycine betaine/choline-binding (Lipo) protein of an ABC-type transport system (Osmoprotectant binding protein) similarity KEGG
DB: KEGG
  • Identity: 52.4
  • Coverage: 166.0
  • Bit_score: 169
  • Evalue 5.90e-40
Putative glycine betaine/choline-binding (Lipo) protein of an ABC-type transport system (Osmoprotectant binding protein) {ECO:0000313|EMBL:CCG05393.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.4
  • Coverage: 166.0
  • Bit_score: 169
  • Evalue 2.90e-39

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Blastococcus saxobsidens → Blastococcus → Geodermatophilales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 522
GCCCCTGCCCAGGACCGCAACGGCTTCGTGGTCACCGGCGACCTGGCCCGCCGCCGCAACCTGGTGAAGCTCAGCGACCTGGCCCCAATGGCGTCCCAGCTGTCCTTCGGCGGCCCGCCCGAGTGCCCCGAGCGGCCGCTGTGCCTCAAGGGCCTCCAGGAGCTCTACAAGCTGCGGTTCGCCCGGTTCGAGGCGATGCCGTCGCGGGCGGTGACGGCGGCGGCCTTGGACACTGGCGAGATCGACGTCGGCATGATCGAGACCACCGACCCCAACCTGGTCAAGGCCGACCTGGTCCAGCTGACCGACGACCGCCGCCTCCAGCCGGCCGACAACGTGGTCCCGGTGGTCCGCCGCGAGGTCCTGGACGCCTACGGCCCTCAGCTGGTCCGGCTTGTCAACGCCGTCAGCGCCAAGCTCACCACCGGGGAGCTGACCAGGCTCAACCTCCAGGTGCTCGACGGCCAGCCGGCCGCCGACGCCGCCTCGGCCTGGCTGCGCGCCCACACCATCATCGGCTAG
PROTEIN sequence
Length: 174
APAQDRNGFVVTGDLARRRNLVKLSDLAPMASQLSFGGPPECPERPLCLKGLQELYKLRFARFEAMPSRAVTAAALDTGEIDVGMIETTDPNLVKADLVQLTDDRRLQPADNVVPVVRREVLDAYGPQLVRLVNAVSAKLTTGELTRLNLQVLDGQPAADAASAWLRAHTIIG*