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PLM1_30_b1_sep16_scaffold_17222_1

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 1..684

Top 3 Functional Annotations

Value Algorithm Source
O-antigen polymerase Tax=Calothrix sp. PCC 6303 RepID=K9UWZ5_9CYAN similarity UNIREF
DB: UNIREF100
  • Identity: 27.6
  • Coverage: 214.0
  • Bit_score: 68
  • Evalue 6.60e-09
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR61125.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.6
  • Coverage: 230.0
  • Bit_score: 234
  • Evalue 9.70e-59
O-antigen polymerase similarity KEGG
DB: KEGG
  • Identity: 27.6
  • Coverage: 214.0
  • Bit_score: 68
  • Evalue 1.90e-09

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Taxonomy

Micromonospora carbonacea → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 684
CTCTCCAGGCGACTCAGGCTGCCGATGGCTGTCATGCTGGCCGGCTGCGGTGGCTTCCTGCTGCTCACCTACACCCGCACCGCGATCCTGGGCACGGTGATCGGCCTGGTGATCGTCGGTCTGGTGCAGAGCAAGCGGCTGCTGCTTGGGCTCGTCGTGGCCGCCATCTGCGCGTTACTGCTGGTGCCGCAGCTGTCGGGCCGCTTCTCCAGTGTCACCGACCTGTCGAGTACGGGCAGCCAGCCGAGCGGCAACTCCCTGGTATGGCGGCTCAATTACTGGACCGAGGTGCTGCCGCTGGCCAACGGCAACCCGGTTAGCGGCATCGGGCTCAACATGACCCAGTACAACACCGACGCCGCCAAGCAGCCGCACAACGACTTCATCCGCGCCTACGTCGAGATGGGCCTGATCGGCCTTGGCGCCTACCTGGCCGTGCTGATCGCCCTGGTCGGCCTCGGCCGCCGCGCGGTCAGGGCGTCACCGTCAGGCACGTTCGACCGGGGCATCGCCGCGGGATTCCTCGGCTGTGCGGTGGCGTTCGTGGCCGTCAGCGCGTCGGCCAACATCACCTCGAACGTCGTCAGCCTCTGGTACCTGTTCGCCTTCGCCGCCGCCGCCTCCGGCGTGGTCCGCCGGCGGCAGGCCCAGACCGGCGCACCCGCCAGCACCCCGGTGCCGTGA
PROTEIN sequence
Length: 228
LSRRLRLPMAVMLAGCGGFLLLTYTRTAILGTVIGLVIVGLVQSKRLLLGLVVAAICALLLVPQLSGRFSSVTDLSSTGSQPSGNSLVWRLNYWTEVLPLANGNPVSGIGLNMTQYNTDAAKQPHNDFIRAYVEMGLIGLGAYLAVLIALVGLGRRAVRASPSGTFDRGIAAGFLGCAVAFVAVSASANITSNVVSLWYLFAFAAAASGVVRRRQAQTGAPASTPVP*