ggKbase home page

PLM1_30_b1_sep16_scaffold_46446_3

Organism: PLM1_30_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 48 / 55 MC: 6 BSCG 48 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(986..1495)

Top 3 Functional Annotations

Value Algorithm Source
ferredoxin Tax=Salinispora pacifica RepID=UPI0003675F37 similarity UNIREF
DB: UNIREF100
  • Identity: 70.8
  • Coverage: 113.0
  • Bit_score: 174
  • Evalue 6.40e-41
Ferredoxin {ECO:0000313|EMBL:CCH77781.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.6
  • Coverage: 109.0
  • Bit_score: 176
  • Evalue 2.30e-41
Ferredoxin 1 similarity KEGG
DB: KEGG
  • Identity: 73.8
  • Coverage: 103.0
  • Bit_score: 174
  • Evalue 2.30e-41

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Tetrasphaera japonica → Tetrasphaera → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 510
GTGACCTACGTCATCACCGAGCCCTGCATCGACGTCAAGGACAATTCCTGCATCGAGGAATGCCCGGTCGACTGCATCTACGAGGGCGACCGCATGCTCTACATCCACCCCGAGGAGTGCGTCGACTGCGGCGCCTGCGAGCCCGTCTGCCCGGTGGAGGCCATCTTCTACGAGGACGACGTGCCCGCCCAGTGGAAGGATTTCACCCAGACCAACGCGGCCTTCTTCACCGAGGGCGACGAGCCGCTCGGCTCGCCCGGCGGGTTCTCCAAGATTGGCCCGCTGGTGCGCGACACCGCCTTCATCGCCAACTACCAGCTCCCCGCCCCGACAGCTAACAGCCCAGCCCACGAGCCGACGTGGGCGGCCCAGGTCAACGGCGCGACCGTGACTGGCGCTGGGTGGCGGTCGACCGGGGCGAGCCTTACCCGCCGATCTCGATCGAGGCCGGTCGGACTGGCAGGGCGGCGCGCAGCTCGGAGTAGCGTCGCCACGTTCCCCGAATATTGA
PROTEIN sequence
Length: 170
VTYVITEPCIDVKDNSCIEECPVDCIYEGDRMLYIHPEECVDCGACEPVCPVEAIFYEDDVPAQWKDFTQTNAAFFTEGDEPLGSPGGFSKIGPLVRDTAFIANYQLPAPTANSPAHEPTWAAQVNGATVTGAGWRSTGASLTRRSRSRPVGLAGRRAARSSVATFPEY*