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PLM1_5_b1_sep16_scaffold_2577_2

Organism: PLM1_5_b1_sep16_Actinobacteria_67_8

near complete RP 44 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 10 / 38 MC: 2
Location: 1536..2153

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDC89 similarity UNIREF
DB: UNIREF100
  • Identity: 52.1
  • Coverage: 190.0
  • Bit_score: 173
  • Evalue 1.30e-40
sigK; RNA polymerase sigma factor, ECF family similarity KEGG
DB: KEGG
  • Identity: 44.5
  • Coverage: 211.0
  • Bit_score: 166
  • Evalue 7.80e-39
Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.9
  • Coverage: 195.0
  • Bit_score: 280
  • Evalue 1.80e-72

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Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 618
ATGAGCGAAACTGCTCGGCCAGTGGTTCGGTCCTTTGCGCACCTTTCCGATGAGGCAGTCGTCGCTCTGCTTGCGCGCTCGGACGAGTCGGCGCTCGCCGAGCTCTACGACCGGTTCGGCCGGGTGGCATACGGTCTCGCTCTGCGAATCCTCCGGGACGACAAGCTCGCAGAGGATGCCGTGCAGGAAGGTTTCCTCACCGCGTGGCGAAACGCCGACCGCTTTATGCCGGAGCGCGGGAAGGCCAGCACCTGGTTGCTGACACTCGTCCACCGCCGCGCCGTCGATCTCGTGCGCCGCGAGGACCGGCGCCGAGCGGAGCCGCTCAGCGAGACCGTCGAGCCAGAGGCGTCGGGCTCTGCGGAGGACGATGCGTGGCTCCGCTTCGAACGTGAGCGTGTGCAGTCGGCCCTGAAGCAGCTGCCGGACCAGCAGCGCGAAGCACTCGAGCTGGCGTACTACGGTGGCTTCAGCCAGACGGAGCTCGCGGAAAGACTCGGACAACCCGTCGGTACGATCAAGAGCAGGATGTTCACGGGCCTGGCGCGGCTCCGTGAGCTGCTTGCAGAGCCCGGGAACGGAGAGGCGGCATGGAAGCCAACGCCCTACACGACCTGA
PROTEIN sequence
Length: 206
MSETARPVVRSFAHLSDEAVVALLARSDESALAELYDRFGRVAYGLALRILRDDKLAEDAVQEGFLTAWRNADRFMPERGKASTWLLTLVHRRAVDLVRREDRRRAEPLSETVEPEASGSAEDDAWLRFERERVQSALKQLPDQQREALELAYYGGFSQTELAERLGQPVGTIKSRMFTGLARLRELLAEPGNGEAAWKPTPYTT*