ggKbase home page

PLM1_5_b1_sep16_scaffold_626_1

Organism: PLM1_5_b1_sep16_Actinobacteria_67_8

near complete RP 44 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 10 / 38 MC: 2
Location: comp(1..324)

Top 3 Functional Annotations

Value Algorithm Source
squalene synthase (EC:2.5.1.32) similarity KEGG
DB: KEGG
  • Identity: 54.4
  • Coverage: 103.0
  • Bit_score: 115
  • Evalue 8.30e-24
Squalene synthase HpnC Tax=Frankia sp. CN3 RepID=G6HN99_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 53.2
  • Coverage: 111.0
  • Bit_score: 116
  • Evalue 1.00e-23
Marine sediment metagenome DNA, contig: S01H1_S32590 {ECO:0000313|EMBL:GAG39214.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.0
  • Coverage: 100.0
  • Bit_score: 122
  • Evalue 3.40e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 324
ATGGATGTGGCTGCCGTCGCCCGCCGAGCCCGAACCGAGAACTTTCCGGTTGCCTCGGTCCTGTTTCCTCGCCGCCTGCGACCGCATCTACGCGCCGTCTACGGGTTCGCCCGCCTGGTGGACATCCTCGGCGACGAGGTGGAGGGCGATCGACTCGCCACGCTGGACGAGCTCGAGCGTGAGGTCGAAGCCTGCTACCGGAGCGAGCCGACCTGGCCGGTGATGCGTGCGCTAGCTCCCACCATCCACGAGTTCTCCCTGCCCCGTGAGCCGTTCCTGCGCCTGATCGAGGCGAACCGGATGGACCAGCGCATCTCGGAGTAC
PROTEIN sequence
Length: 108
MDVAAVARRARTENFPVASVLFPRRLRPHLRAVYGFARLVDILGDEVEGDRLATLDELEREVEACYRSEPTWPVMRALAPTIHEFSLPREPFLRLIEANRMDQRISEY