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PLM1_5_b1_sep16_scaffold_529_1

Organism: PLM1_5_b1_sep16_Actinobacteria_67_8

near complete RP 44 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 10 / 38 MC: 2
Location: comp(772..1101)

Top 3 Functional Annotations

Value Algorithm Source
LuxR family transcriptional regulator Tax=Salinispora pacifica RepID=UPI00036A2BCD similarity UNIREF
DB: UNIREF100
  • Identity: 52.4
  • Coverage: 82.0
  • Bit_score: 79
  • Evalue 1.80e-12
regulatory protein LuxR similarity KEGG
DB: KEGG
  • Identity: 51.2
  • Coverage: 82.0
  • Bit_score: 77
  • Evalue 1.90e-12
Regulatory protein, LuxR {ECO:0000313|EMBL:ABP56269.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.2
  • Coverage: 82.0
  • Bit_score: 77
  • Evalue 9.60e-12

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Taxonomy

Salinispora tropica → Salinispora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 330
ATGGACGCCGCAGAGCGCAAAGAGATCCTGAGCCGCTACATGGACCATCAGCGCCGTTTCGAGGCTGTTGCCGCCAAGCGGCAGAACGGAAATGCCGAGGTCATCCCGTTCGCAGGTCCCCTCCGCGAGCTGGAGCAGGAGCCGACCATGCGGGAGATCGAGGTGCTTCAACTGATCTCGGACGGCCTCGTGAACCGTGAGATCGGAGTCCGCCTCTTCCTGAGCGAAGAGACGGTCAAGTCGCACGTCCGCCACCTGCTCGCCAAGCTGCAAGCCCGCTCGCGGGCGCACGCGGTCGCCGTCGGCTTCCGACGCGGCCTGATCGCCTAG
PROTEIN sequence
Length: 110
MDAAERKEILSRYMDHQRRFEAVAAKRQNGNAEVIPFAGPLRELEQEPTMREIEVLQLISDGLVNREIGVRLFLSEETVKSHVRHLLAKLQARSRAHAVAVGFRRGLIA*