ggKbase home page

PLM1_5_b1_sep16_scaffold_1909_5

Organism: PLM1_5_b1_sep16_Actinobacteria_67_8

near complete RP 44 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 10 / 38 MC: 2
Location: comp(4948..5262)

Top 3 Functional Annotations

Value Algorithm Source
preprotein translocase subunit YajC Tax=Salinispora pacifica RepID=UPI00038158D8 similarity UNIREF
DB: UNIREF100
  • Identity: 45.3
  • Coverage: 95.0
  • Bit_score: 88
  • Evalue 3.70e-15
preprotein translocase subunit YajC similarity KEGG
DB: KEGG
  • Identity: 45.2
  • Coverage: 93.0
  • Bit_score: 87
  • Evalue 1.80e-15
Protein translocase subunit yajC {ECO:0000313|EMBL:ABP54274.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.2
  • Coverage: 93.0
  • Bit_score: 87
  • Evalue 8.80e-15

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Salinispora tropica → Salinispora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 315
GTGTTCCAGTACTTCTTCATCCTCGTCCTGCTGGCCCTCGTGTGGGTCATGCTGATCCGGCCGCAGCGGCGCCGGCAGCAGGAGGCGCAGCGACTTCTCCAGTCGATCGGCGTGGGGAAGGAGATCGTGACAGCAGGCGGGCTCTACGGAACGGTCACGGCGGTCGAGGACGACGAAGTGCGGGTTCAGATTGCGGACGGCGTCGAGGTCCGCGTCGCCAAGAGGGCCGTCGCAGGGGTCGTCAGCGAGGACGAGAATGACCCGGAGGAGGCACAGCCGGAGGAGGACGCCCCGGCTACCCTTCCTAATCCGTGA
PROTEIN sequence
Length: 105
VFQYFFILVLLALVWVMLIRPQRRRQQEAQRLLQSIGVGKEIVTAGGLYGTVTAVEDDEVRVQIADGVEVRVAKRAVAGVVSEDENDPEEAQPEEDAPATLPNP*