ggKbase home page

PLM1_5_b1_sep16_scaffold_7752_7

Organism: PLM1_5_b1_sep16_Actinobacteria_67_8

near complete RP 44 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 10 / 38 MC: 2
Location: 2785..4356

Top 3 Functional Annotations

Value Algorithm Source
histidine kinase Tax=Frankia sp. Iso899 RepID=UPI0003B44E39 similarity UNIREF
DB: UNIREF100
  • Identity: 47.0
  • Coverage: 385.0
  • Bit_score: 315
  • Evalue 7.10e-83
Putative sensor kinase {ECO:0000313|EMBL:AKG47135.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.4
  • Coverage: 405.0
  • Bit_score: 310
  • Evalue 2.50e-81
PAS domain S-box similarity KEGG
DB: KEGG
  • Identity: 43.9
  • Coverage: 394.0
  • Bit_score: 299
  • Evalue 1.10e-78

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 1572
ATGTCTCAGAGTCCTGACTTCGTCCTCGGGGACGACTTCGCCCGCGTCCTCACCGAGACGACGATGTCGCTCGTCTGCGTCCTGGGCGAGGACGGAAGGATCCTGTTCTTCAACGAGGCCTGCGAGCGCCTGACCGGCTTCACCCGCAACGAGGTGCTCGGGCGCGATGCCCGCGAGCTCGTCATCCCTCCCGAGGAAGCCGAGGCTTTCGGCGAGGTGCTTGCGTACATCTGGAAGACCGGCCTCGCGAGCCCTCAGGTCGGGCACTGGCTGGCGAAAGACGGAGCACGGAAGCTCGTTGCCTGGTCGAACAAGCTCATGCCAGGGCAGGACGGCGCACCCTCGATCCTCGTGACGGCCGGAATCGATCTGAGCGCACCCCCGAAAGGCGTCTCGGACGAGGTCGCATTCGAATNNNNNNAATTCGATCTCGAGGCGAAGCTCCACGAGGTCGGGCGCCTCGCGCAGGAACAGCGTGCGCTTCGTCGAGTCGCCACCCTCGTCGCATCGGAAGCGAGCCCCGAGCGCGTCTTCACGGCCGTCTCGGAGGAGTGCGCCCGCGTGCTCGAGGTGGATGCGTCCGCTGTCTTTCGCTACGAGGGAGACGACACGGCGACGATCGTGGGGCGACACAGCCGCTCAGGAGATGAGGACGCGTTCACCCTCGGCCTGCGCCTCCCCGCCGACGAGAACACCGGCATCGGCCGCGTGCTGCAGACCGGTGCCCCGGCGCGCATCCACGACTACACCAACCGGACCGGACAGACGGCGGACAACATGCGGCTCATGGGCTACCGCTCGAGCGTGTCGGCACCGATCATCGTCGCCGGCATCATGTGGGGCGCCGTCGGAATCGCGAGTGCCGAACCGCTGCCGGCCGACACGGAGGCACGGCTCGGCGCATTCTGCGAGCTCGTCTCCCTCGCCGTCGCAAGCGCGCAGGCACGCGAGGACCTGAGCGCATCCCGGGCGCGGCTCGTCAAGGCGGGCGACGTGCAACGCCGAAAGCTCGAACGCAATCTGCACGACGGCGCGCAGCAGCGCCTCGTCTCATTGGCGCTGACGATCCGGCTCGCCCGCCGGCAGCTCGAGACCAACCCGGAGGCTGTTGCGGCCTCGCTCGAGGGCGCCGCGAACGAGCTCGACCTGGCACTTGCAGAGCTGCGCGAGCTCGCCCGCGGCCTGCATCCGGCTGCACTGACAGAGCAAGGACTCGGCCCCGCGATCACGGCGGCCGTGCAGAAACTCCCGATCGAGGTCGACATCTCCGTCCCGGATGTCCGGCTGCCGGAGAACATCGAGGCGACGGTGTACTACATCGTCCTCGAAGCACTCACGAATGTCGCAAGGCACGCCGAGGCGACGCAGGCGAAGGTGACGATCCAGCTGGACGACCACGTTCTGCGCTTCGAGATTACGGACGACGGTCGCGGTGGTGCAGATCCCGCCAGCGGTACCGGAATCCTCGGCCTGCGCGATCGCGCGGAGGCAGTGGGCGGCACGCTGTTCGTGATCAGCCCGCCGAGCAAGGGCACGGTGGTGACCGCGCAGCTCCCGCTCAGGCCCGCCTGA
PROTEIN sequence
Length: 524
MSQSPDFVLGDDFARVLTETTMSLVCVLGEDGRILFFNEACERLTGFTRNEVLGRDARELVIPPEEAEAFGEVLAYIWKTGLASPQVGHWLAKDGARKLVAWSNKLMPGQDGAPSILVTAGIDLSAPPKGVSDEVAFEXXXFDLEAKLHEVGRLAQEQRALRRVATLVASEASPERVFTAVSEECARVLEVDASAVFRYEGDDTATIVGRHSRSGDEDAFTLGLRLPADENTGIGRVLQTGAPARIHDYTNRTGQTADNMRLMGYRSSVSAPIIVAGIMWGAVGIASAEPLPADTEARLGAFCELVSLAVASAQAREDLSASRARLVKAGDVQRRKLERNLHDGAQQRLVSLALTIRLARRQLETNPEAVAASLEGAANELDLALAELRELARGLHPAALTEQGLGPAITAAVQKLPIEVDISVPDVRLPENIEATVYYIVLEALTNVARHAEATQAKVTIQLDDHVLRFEITDDGRGGADPASGTGILGLRDRAEAVGGTLFVISPPSKGTVVTAQLPLRPA*