ggKbase home page

PLM1_30_coex_sep16_scaffold_7461_6

Organism: PLM1_30_coex_sep16_Actinobacteria_68_7

near complete RP 43 / 55 MC: 3 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(2970..3176)

Top 3 Functional Annotations

Value Algorithm Source
exodeoxyribonuclease VII small subunit (EC:3.1.11.6) similarity KEGG
DB: KEGG
  • Identity: 57.6
  • Coverage: 59.0
  • Bit_score: 64
  • Evalue 1.10e-08
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.3
  • Coverage: 67.0
  • Bit_score: 64
  • Evalue 5.20e-08
exodeoxyribonuclease VII small subunit Tax=Sphingomonas RepID=UPI000263054D similarity UNIREF
DB: UNIREF100
  • Identity: 51.8
  • Coverage: 56.0
  • Bit_score: 65
  • Evalue 1.70e-08

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas sp. RIT328 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 207
GTGAACGACGCTGTCACTTTCGAGGATGCCCAGCGCGAGCTCGAGCGGATCGTGTCCGAGCTCGAAGGCGGTCGCGCCAGCCTCGAGGACGCGGTCGTCCTCTGGGAGCGCGGCGACGAGCTTTACCGCTACTGCCTCGGCAAGCTCGACTCGGCGGAGGGGAAGATCGAGGAGCTCGGGGCCCGGATCGAGGAGGCACGTCCTTGA
PROTEIN sequence
Length: 69
VNDAVTFEDAQRELERIVSELEGGRASLEDAVVLWERGDELYRYCLGKLDSAEGKIEELGARIEEARP*