ggKbase home page

PLM1_30_coex_sep16_scaffold_13765_4

Organism: PLM1_30_coex_sep16_Actinobacteria_68_7

near complete RP 43 / 55 MC: 3 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 2463..2954

Top 3 Functional Annotations

Value Algorithm Source
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB Tax=Patulibacter medicamentivorans RepID=H0E2U0_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 54.3
  • Coverage: 164.0
  • Bit_score: 186
  • Evalue 2.00e-44
MiaB family RNA modification protein similarity KEGG
DB: KEGG
  • Identity: 53.7
  • Coverage: 164.0
  • Bit_score: 182
  • Evalue 8.40e-44
Tax=RBG_16_Actinobacteria_67_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 77.2
  • Coverage: 123.0
  • Bit_score: 202
  • Evalue 3.00e-49

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Actinobacteria_67_10_curated → Acidimicrobiia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 492
GTGAAGAGCTACTTCGTGACCACGTTCGGATGCCAGATGAACGCTCACGATTCGGAGCGAATCAAAGGCATGCTCGAGTCGCTCGGCCTGGGCGAGGCCCATTCACAGCAAGACGCCGACGTGATCGTTTTCAACACGTGCACTGTGCGCGAGAAGCCCGACCAGCGCTTCGCGGCTCACCTCGCTCAGGCGGCCGCGCTGAAGCGCGCGGACCCGGAGCGGGTCATCGCCGTCGGCGGTTGCTACGCGGAGGCGCAGCGCGAGCGAATTTTCGACCTCTATCCGTATGTGGACGTCGCGTTCGGGCCGGGGTCGATCCCGCACCTCGGGGACTGGATCGGCGCCGGTGGCGACGGCGTGGCGAGAGGCAGGTTTGGCCTCGAGGAGAGGAGCTTCGCAGCGCAGCTCCCTTCCCACCGGCAGCGTCCGCTCCAGGCGTGGGTGCAGGTCTCGATGGGCTGCAACTCGGTCTGCTCCTACTGCATCGTCCCG
PROTEIN sequence
Length: 164
VKSYFVTTFGCQMNAHDSERIKGMLESLGLGEAHSQQDADVIVFNTCTVREKPDQRFAAHLAQAAALKRADPERVIAVGGCYAEAQRERIFDLYPYVDVAFGPGSIPHLGDWIGAGGDGVARGRFGLEERSFAAQLPSHRQRPLQAWVQVSMGCNSVCSYCIVP