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PLM2_5_b1_sep16_scaffold_11_19

Organism: PLM2_5_b1_sep16_Actinobacteria_Rubrobacteridae_69_19

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: comp(17656..18120)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma24 factor Tax=Rhodococcus opacus RepID=UPI00029CAFE8 similarity UNIREF
DB: UNIREF100
  • Identity: 52.6
  • Coverage: 156.0
  • Bit_score: 152
  • Evalue 3.10e-34
RNA polymerase sigma-E factor similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 156.0
  • Bit_score: 152
  • Evalue 8.70e-35
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 56.0
  • Coverage: 150.0
  • Bit_score: 166
  • Evalue 2.20e-38

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Taxonomy

RBG_19FT_COMBO_Actinobacteria_70_19_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 465
ATGACCGCACTGCCGCCGTTCCAAGCCCTGCTCGACGAGCATGCAACCGACGTGATGGCGGTGTTACGCGGCGCGGTCGGCCGCGCCGACGCCGAGGACTGCTTCCAGGAGACCTTCCTGGCTGCGTTGCGCGCCTACCCGAAGCTGGGCGATGACCGCAACCTGCGCGGCTGGCTGCTGACGATCGCCCATCGCAAGGCGATCGACCACCACCGGGCAAACGGACGGCGACCGCTTCCGGTCGCCGAGGTGGAGGAGGCGGCCGGAGCCATCGAGCTCCCGCGCGATGACGGGATCTGGATCTTGGTAGGGGCCCTGCCACCGAAGCAGCGCGCGGCGGTGGCGCTGCGCTACGCCTGCGATCTCCCCCACGCCGAGATCGCCGCGGCGCTCGGCTGCTCGCCCGATGCGGCGCGCCGCAGCCTCCACGAGGGAATGAAGCGACTGAGAAAGGAGCTGGCATGA
PROTEIN sequence
Length: 155
MTALPPFQALLDEHATDVMAVLRGAVGRADAEDCFQETFLAALRAYPKLGDDRNLRGWLLTIAHRKAIDHHRANGRRPLPVAEVEEAAGAIELPRDDGIWILVGALPPKQRAAVALRYACDLPHAEIAAALGCSPDAARRSLHEGMKRLRKELA*