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PLM2_5_b1_sep16_scaffold_9_17

Organism: PLM2_5_b1_sep16_Actinobacteria_Rubrobacteridae_69_19

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: 15034..16602

Top 3 Functional Annotations

Value Algorithm Source
Putative cell surface protein Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YX27_METPS similarity UNIREF
DB: UNIREF100
  • Identity: 44.8
  • Coverage: 299.0
  • Bit_score: 246
  • Evalue 5.30e-62
Putative cell surface protein {ECO:0000313|EMBL:BAI60999.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /; SANAE).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.8
  • Coverage: 299.0
  • Bit_score: 246
  • Evalue 7.40e-62
cell surface protein similarity KEGG
DB: KEGG
  • Identity: 37.4
  • Coverage: 420.0
  • Bit_score: 236
  • Evalue 1.20e-59

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Taxonomy

Methanocella paludicola → Methanocella → Methanocellales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1569
ATGGCGCGGCATTTGTTCGTCGCCAATTCGGGGAACGGGTCGGTTTCGGTGGCGGATGCCGGCACTAGGTCGGTGGTTGCGACGGTCGCGGTCGGGGGCGAACCGGTGGATGTGGCGATCGCGCCTGACGGCACCCGTGCCTACGTGGCTAACAAAGGCAATAACTCGGTCGCGGTGATCGAGACGAAGACGAACGCGCAGGTCGCCACGATCGCGGTCGGCAAAGAACCGATGGGAGTCGCGGTCAGCCCGGATGGGCATCGCGTCTACGTGAGCAATTTCGGCGACGACACCGTCTCGGTCATCGACACCGGCAGCAACGCGGTGGTCGGCGCCCCGATCGCGGTCGGCAAAGAACCCGACGGGGCCGCGGTCTCGCCCGACGGGTCTCGCCTCCTCGTCGCTCAGCGCGGCGGCAACGTCTCGGTCATCGATACCGGTACGAACGCACTCGTCGGCTCGGCCGCCGACCTGCTGGGCCCCTCGCGGCTGGCGGTCGTCCCGGACGGCGGGCGGGCGTTCGTCACCAACAGCGCCTCGACTTCGGTAACCGCCTTCAGCCCGCTGAACGGAAGCCTTGCCGGGGGCCCGATCTTCATCGGCACCCAGCCGGCCGGGATCGCGATCGTGCCGAGCGGCCAGGCCGCCTATGTGGCCGGTCCCCTCGACGGCACGATCACGCCGCTCGACACTTCGAGCAATGCGCCGCTCAGCGCCCCGATCGGCGGCTTCCCCGGCGCCACCGGGATCGCGATTGGGCCTGACGGGCTGCAGGGATATGTCACCGACGGTGCCGGCTCCACGGTGTCGATCTTCGATCTGGCCACCAACGTCCCCATCGGCGCGATTCCGGTCGGTACGAAGCCGGTTGGGATCGCGGTCGTGCCCGACCAGGGGCCGCGGGCGTCGCTCTTCGTCTCGCCGGCCCGCAAACGGGCGAAGAAGGCAGTCGCCTTCCACGGCTCCGGCTCCCTCGATCCCGACGGCAAGATCGCCACCTACGCCTGGGACTTCGGCGACGGCGTGCGCCTGGAAGGGGGGCAGGAGACCCGCTTCCACCGCTACCGCAAGCCCGGCGAATACCTCGTCACCCTGAAGGTGACCGACGAGGAGGGCTGCTCGACCGGGTTCGTCTATACCGGCCAGACGGCGTCCTGCCACGGTTCCCCGCTCGCAGTCGCCAGCAGCACGATCAGCGTGGGCGACACGAGCGGACCGATCCTGCGGCTCGCCGGCGCCAAGACGCAGCGGCTGGGGGGCCGGATCGGCGTCCGCGCGCGCTGCCCGCGCGAGCCCTGCGCCCTGCGCGCCCACGGCGTCCTGGTGACGACTTCCGCCCTCAACGTCAGGGGTAAGCCCCGCGGCAAGCGGCTCGGCACGGCGCAGGCGCTGCGCCCCACGCGTGGCTGGCGCACGCTGCGCTTGCGGGTGCCGGCGGGGGCCCGGCGAGCGGCACTGCGATCCCTGGCTTTGGGCGGCGAGGTAAAGGCCAAGGTCGTGGTGATCGCACGCGACGACGACGACGAACTGCGGCTACAACAGCGCAAGATCGAGCTGCTCGCACCCTAG
PROTEIN sequence
Length: 523
MARHLFVANSGNGSVSVADAGTRSVVATVAVGGEPVDVAIAPDGTRAYVANKGNNSVAVIETKTNAQVATIAVGKEPMGVAVSPDGHRVYVSNFGDDTVSVIDTGSNAVVGAPIAVGKEPDGAAVSPDGSRLLVAQRGGNVSVIDTGTNALVGSAADLLGPSRLAVVPDGGRAFVTNSASTSVTAFSPLNGSLAGGPIFIGTQPAGIAIVPSGQAAYVAGPLDGTITPLDTSSNAPLSAPIGGFPGATGIAIGPDGLQGYVTDGAGSTVSIFDLATNVPIGAIPVGTKPVGIAVVPDQGPRASLFVSPARKRAKKAVAFHGSGSLDPDGKIATYAWDFGDGVRLEGGQETRFHRYRKPGEYLVTLKVTDEEGCSTGFVYTGQTASCHGSPLAVASSTISVGDTSGPILRLAGAKTQRLGGRIGVRARCPREPCALRAHGVLVTTSALNVRGKPRGKRLGTAQALRPTRGWRTLRLRVPAGARRAALRSLALGGEVKAKVVVIARDDDDELRLQQRKIELLAP*