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PLM2_5_b1_sep16_scaffold_7623_5

Organism: PLM2_5_b1_sep16_Acidobacteria_Holophagae_53_17

near complete RP 47 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(2886..3638)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003792};; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.0
  • Coverage: 249.0
  • Bit_score: 323
  • Evalue 1.30e-85
tRNA pseudouridine synthase A (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 48.2
  • Coverage: 249.0
  • Bit_score: 226
  • Evalue 4.50e-57
tRNA pseudouridine synthase A Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RZP5_THEOJ similarity UNIREF
DB: UNIREF100
  • Identity: 48.2
  • Coverage: 249.0
  • Bit_score: 226
  • Evalue 1.60e-56

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Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 753
ATGAACTATAAATTGCTGATCCAATACGACGGGACCGACTTCCACGGCTGGCAAGTGCAGGAAAATGACCGGACAATTCAGGGCGAATTGGAACGGGTGATCGGAATGTTGGCAGATACAGACGTAAGTGTCGTCGGATCGGGCCGTACCGATGCCGGTGTACATGCCGAGGGTCAGGTTGCCAATGTTCATCTCGGCGGCAAGTTCACTCCGGAAAGACTTAGGCACGCGATCAACGGCAATCTCTGGCGGGACATCAGGATCATGAATGCCGAAAAGATATCGGACGATTTTCACTCGCGCTTTTCGGCAAAAAAGAAAACGTATATCTACCGCATCGTTAACGCGCCAGTGATGTCGCCTTTCTGGCGTCGGTACGCCCATCACGAAGCGCGTCCGCTCGATGTTGGGCGTATGAATGAAGCGGCCCGGCTTTTTCTCGGCGAACATGATTGGACAGCGTTTGCGTCGTCAAAGTCAGATGGTGAGAGCCGGGTAAGAAGCGTTCTGGACTTTACGGTCGAATCACGCTGGGATGACGTCGCCCGGGGAGCCATGATAGAACTTCGAATTACGGCACACGGATTTCTGCGGTATATGGTGCGGTCTATTGCCGGTACTATGCTCGAGGTCGGGCGAGGCGAAAAGGACGCCGATACTATTCAAACAGCAATCGTTACGGGAGACCGGAGTTTGGCGGGACAGACGGCGCCCGCGCACGGATTGACACTTCTGCGGGTGGATTACGACTGA
PROTEIN sequence
Length: 251
MNYKLLIQYDGTDFHGWQVQENDRTIQGELERVIGMLADTDVSVVGSGRTDAGVHAEGQVANVHLGGKFTPERLRHAINGNLWRDIRIMNAEKISDDFHSRFSAKKKTYIYRIVNAPVMSPFWRRYAHHEARPLDVGRMNEAARLFLGEHDWTAFASSKSDGESRVRSVLDFTVESRWDDVARGAMIELRITAHGFLRYMVRSIAGTMLEVGRGEKDADTIQTAIVTGDRSLAGQTAPAHGLTLLRVDYD*