ggKbase home page

PLM2_5_b1_sep16_scaffold_7623_9

Organism: PLM2_5_b1_sep16_Acidobacteria_Holophagae_53_17

near complete RP 47 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(5489..6037)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, CarD like protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LG97_CHLTF similarity UNIREF
DB: UNIREF100
  • Identity: 38.5
  • Coverage: 156.0
  • Bit_score: 118
  • Evalue 5.80e-24
Transcriptional regulator, CarD family {ECO:0000313|EMBL:CDM65831.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.7
  • Coverage: 170.0
  • Bit_score: 148
  • Evalue 7.40e-33
transcriptional regulator, CarD like protein similarity KEGG
DB: KEGG
  • Identity: 38.5
  • Coverage: 156.0
  • Bit_score: 118
  • Evalue 1.60e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 549
ATGAGGCTGATCATGCCGCTCAAAGTCGGTGAAAAGGTGGCCTACCCCAACCAGGGCGTTTGCCTGGTCGAAGAGTTCAAACAATGCACCATCGGCGGTCGGCTGATGAGGGGTTACTCTCTCCGCGTTCAAAACGACAATTCGACGATATTTGTGCCCGAGGAAAATGCTGGCAGCGTTGGCATTCGCCCGCTCATTAGTTCATCACAGTGCGAACAACTGATAGATAAGCTCTCAGAGGATTTTGAGCCGGTTTCCTGCGATTGGAAGACGCGCTCGCGCGAGTTTAGCGAACGGCTGCGAAGCGGCGATGTGTTTCAAGCGGCCGAGGTGTTTAAGATGCTCACATTCCTGAGCCATGAAAAGAAACTCTCGTTTCGCGAACAAACGCTGTTGGAAAAATCCAAATTCCTGATCCTGTCGGAAATTAAGAACGCCTATACAAAAAAACGCCCTCCGGTCGAGGACGACATTATAGGCATGGTCGAATCTGCTTGTTCAAAGCACGTCTTTACCCAGCCCAAGGTCATGTCAGTGGCAGTCCACTGA
PROTEIN sequence
Length: 183
MRLIMPLKVGEKVAYPNQGVCLVEEFKQCTIGGRLMRGYSLRVQNDNSTIFVPEENAGSVGIRPLISSSQCEQLIDKLSEDFEPVSCDWKTRSREFSERLRSGDVFQAAEVFKMLTFLSHEKKLSFREQTLLEKSKFLILSEIKNAYTKKRPPVEDDIIGMVESACSKHVFTQPKVMSVAVH*