ggKbase home page

PLM2_5_b1_sep16_scaffold_12185_7

Organism: PLM2_5_b1_sep16_Alphaproteobacteria_Rhizobiales_62_16

near complete RP 44 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 9 / 38
Location: comp(5645..7027)

Top 3 Functional Annotations

Value Algorithm Source
GTPase Der Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=DER_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 87.6
  • Coverage: 460.0
  • Bit_score: 814
  • Evalue 3.30e-233
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.4
  • Coverage: 461.0
  • Bit_score: 819
  • Evalue 1.40e-234
engA; GTP-binding protein EngA similarity KEGG
DB: KEGG
  • Identity: 87.6
  • Coverage: 460.0
  • Bit_score: 814
  • Evalue 9.30e-234

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1383
ATGTCCTTCACGATTGCCATTATCGGCCGGCCCAATGTCGGAAAATCGACGCTGTTCAATCGGCTGGTCGGGCAGAAGCTTGCGCTGGTCGATGACGAACCCGGCGTCACCCGCGACCGCCGCGAGGGCGAGGGGCGTCTCGGCGATCTCGAATTCACGCTCATCGACACTGCGGGCCTCGACGAGGGCGCCAAGGGCTCGCTGACCGCGCGGATGCAGGAACAGACCGAGGTTGCGATCGGACTTGCCGACGCCCTGATGTTCGTGATCGATGCACGCGCCGGCCTGACGCCGAACGATCGCGCCTTTGCCGATTTCGCGCGCCGCGCCAACAAGCCGGTGGTGCTGGTCGCCAACAAGAGCGAGGGCAAGCAGGGCGACGCCGGCGCGATGGAGTCCTACGCGCTGGGCCTGGGCGACCCGATCCAGATCTCGGCCGAGCATGGCGAGGGCCTGAGCGATCTCTACGATTCCCTGCGCGCACTGATGCCTGAGCCCGTCGACGAGCCGGAGGAGTTCGACGACGACGAGGTCATCGAGCTTGAAGATCTCGCCAAGCGGCCGATCCGCGTGGCCATTGTCGGCCGCCCCAATGCCGGCAAGTCCACGCTGATCAATCATCTGCTCGGCGAGGAACGGCTGTTGACCAGCGCCGAGGCCGGCACCACCCGCGATTCCATTTCCGTCGAGGTCACCTGGCAGGGCCGGGATTTTCGCGTGTTCGACACCGCCGGATTGCGGCGGCGTTCGCGGATCGAGGAAAAGCTGGAAAAGCTCTCGGTGTCGGATGCGCTGCGCGCCATCCGCTTCGCCGAAGTCGTGGTGCTGATGATGGACGCCCAGAACAAGTTCGAGGAGCAGGATCTGCGCATCGCCGACCTGATCGAGCGCGAGGGCCGCGCGCTGGTGATCGCGGTCAACAAATGGGACTTGATGGGACGGCAGTCGAGCCTGATCTCGGCGTTGCGTACCGACGCCGATCATCTGCTGCCGCAGGTCAAGGGCATGCCGATCGTCGCGGTGTCCGGCCTGATGGGCGAGGGCATCGACCGGCTGATGAGCGCGATCGAAGAGGCCTACGCGGTCTGGAACAGGCGGGTGCCGACGGCATCGCTCAATCGCTGGTTCGAACAGGCGGTGGATGCCAACCCGCCGCCGGCGGTGTCGGGGCGGCGGCTGAAACTGAATTACATCACGCAGGCCAAGGCGCGGCCGCCGAGTTTCATCCTGTTCTGCTCGCGCGCGGACGCCGTGCCGCAATCCTATCTTCGCTATCTCGTCAACTCGTTGCGTGAATTTTTCGAGCTTCCGGGCACGCCGGTGCGGATCGCGCTGCGCGAGAAGGCCAATCCGTTCGCCCACAAGCGCAAGCGGCCATCCTGA
PROTEIN sequence
Length: 461
MSFTIAIIGRPNVGKSTLFNRLVGQKLALVDDEPGVTRDRREGEGRLGDLEFTLIDTAGLDEGAKGSLTARMQEQTEVAIGLADALMFVIDARAGLTPNDRAFADFARRANKPVVLVANKSEGKQGDAGAMESYALGLGDPIQISAEHGEGLSDLYDSLRALMPEPVDEPEEFDDDEVIELEDLAKRPIRVAIVGRPNAGKSTLINHLLGEERLLTSAEAGTTRDSISVEVTWQGRDFRVFDTAGLRRRSRIEEKLEKLSVSDALRAIRFAEVVVLMMDAQNKFEEQDLRIADLIEREGRALVIAVNKWDLMGRQSSLISALRTDADHLLPQVKGMPIVAVSGLMGEGIDRLMSAIEEAYAVWNRRVPTASLNRWFEQAVDANPPPAVSGRRLKLNYITQAKARPPSFILFCSRADAVPQSYLRYLVNSLREFFELPGTPVRIALREKANPFAHKRKRPS*