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PLM2_30_b1_sep16_scaffold_4005_3

Organism: PLM2_30_b1_sep16_Chthoniobacter_flavus_55_21

near complete RP 44 / 55 MC: 1 BSCG 46 / 51 ASCG 12 / 38
Location: 2352..4172

Top 3 Functional Annotations

Value Algorithm Source
Type II/IV secretion system protein, TadC subfamily protein Tax=Oceanicola granulosus HTCC2516 RepID=Q2CID9_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 34.3
  • Coverage: 289.0
  • Bit_score: 173
  • Evalue 5.10e-40
Type II/IV secretion system protein, TadC subfamily protein {ECO:0000313|EMBL:EAR52319.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola granulosus (strain ATCC BAA-861 / DSM 15982 / KCTC 12143 /; HTCC2516).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.3
  • Coverage: 289.0
  • Bit_score: 173
  • Evalue 7.10e-40
PEGA domain protein similarity KEGG
DB: KEGG
  • Identity: 27.0
  • Coverage: 359.0
  • Bit_score: 125
  • Evalue 2.60e-26

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Taxonomy

Oceanicola granulosus → Oceanicola → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1821
ATGAATCCACTAATCACTTCTCACTTTGCCGCAACGCCGAACCCAAGCGAAGGCAGGCCGCCTATTACCATTCGCCGTTGGCGGTCTATCTTCATTCTCGTCGCGCTTGCGCTTCACGGCGTCCTTCCTGCGCAAGAAGAACCCTCACGCCGGGTGACCGGCCAGGAAAAAGCCGCAGGCGCACAGGTCCAGATTAATCAGATCGATAGTTCGCAATTCCCGAAGGTCTCAATTTTCGCCACCGTGCTCAAAGATGGCGAGCCGGTGCCTGACCTGAGCGCGGGCGATTTTCGCGTGCGCGAAGATGAGGTCGATCAAGAGCCGATCACCGTGACGCCAAAGCTCACCCCGCTTTCGGTTGTGCTCACCATGGATACGAGCGGCTCGATGAAAAAGCGACTCGCTGATGCGCAGTCAGCGGCCAAAAGTTTCTTGAAGACATTGCAATCGCAGGACAAGGCGCAGGTGATTCGTTTTGCGCGCGATGTGAAAACGGTTCAGCCGCTCAGCGCCGACCGCGCGGCGGCCGAGGCGGCGATTGATGCGACGACGGCGCGCGGTGACACCGCCCTTTTCGACGCGCTGTACACTTCGGTGGAATCGCTCCGCGATGTGCCAGGTCGCAAAGCAATCGTGCTGCTTAGCGATGGCGTCGATGACGACGGCACGGGGAAACCCTTGAGCAAGAAAACCGTCACCGATGTGCTCGCACTCGCTCGGCAGGTGAACGTTCCCATCTACGCCATCGGATTGGGGACTGAGCTTGACGAGGTGGCTTTGAAAAAAGTCGCGAGCGAAACCGGGGCGCTTTACTTGAATGCCGTCGATCCGAGCGAACTGAAGCGGCTTTATGACAGCATCGGCAAGCAGCTCGCCGGACAATACACCATTGGTTACATCTCGAATCTGCCCGCCGATGGGGCAGAGCACCGCGTGCAATTGCGTTACAGCGGAATCACGAGCACGAAAAGCTATGTCGTTCTCGGGGCCCTCAAAGCACCGACCGCGATAACCGCGGCGTCCACTGTGCAGGCCGACACCGTGGCGGACACCCCGATTTCCGGCAAAAATCCGAGCACCGACCCGAATTCTCCGATCGCCCTTAATTTAGGCGAGGTCGTAAAGGGACGGCTCGGGGACTCCGAGAAGACCGGCAAGTATCACTACTGGCTGCTCGATCTGCCGCCAGGCAAATACAAGTTCGTCCTCGACCTAAAACGCGCGGACGAAAAGGATTCAAACATCGGCGGCAACCTCTACATGATGACAGCGGAGGGCAAAGAGGGCCAAAAGATCGGCATTATGAACGCACTCGATCATCGCCATAGAAGTGTCTTTCAGATCGAGGCGCCCGAGTCGATCAAAGGCGTCCTGCGGTACGCCAATGACTTTACCATTTCCGATTATCATCTCGGCGTTTTCCGCGACAGCGATCAACTCGGTGGACTTTTCTTCGTCAAACCTCCCGTGGTCGCTCCGATCAAGCTCGGCGCGCCAGTGACCACTCCTGTCCTCGATGGCACGGAAACACAAAGACGTGATGTCTATTACGCGATCACGCTGCCGGCCGCCGATTACAAGGTAAGCGTCGAGTTCCAGCGCGTGGACCGGAAGGACAGCAACGTCGGCGGATTCGTCAGCGCGCTGAGCGAAGATGGTGACCATAAGACCGATCAAGTGGTTCGAGTGAACACGATCGGCCCCACGGCCAACGTCGCTGCGAAGTTATCCCTCGCCGATGAAGCAAAGGTCATCTTCCGAACGCGCGCCGACTTCGCGAAGGAAACAGCGGTGTTTAGCGTGGAAAATTGGACGGAGTAG
PROTEIN sequence
Length: 607
MNPLITSHFAATPNPSEGRPPITIRRWRSIFILVALALHGVLPAQEEPSRRVTGQEKAAGAQVQINQIDSSQFPKVSIFATVLKDGEPVPDLSAGDFRVREDEVDQEPITVTPKLTPLSVVLTMDTSGSMKKRLADAQSAAKSFLKTLQSQDKAQVIRFARDVKTVQPLSADRAAAEAAIDATTARGDTALFDALYTSVESLRDVPGRKAIVLLSDGVDDDGTGKPLSKKTVTDVLALARQVNVPIYAIGLGTELDEVALKKVASETGALYLNAVDPSELKRLYDSIGKQLAGQYTIGYISNLPADGAEHRVQLRYSGITSTKSYVVLGALKAPTAITAASTVQADTVADTPISGKNPSTDPNSPIALNLGEVVKGRLGDSEKTGKYHYWLLDLPPGKYKFVLDLKRADEKDSNIGGNLYMMTAEGKEGQKIGIMNALDHRHRSVFQIEAPESIKGVLRYANDFTISDYHLGVFRDSDQLGGLFFVKPPVVAPIKLGAPVTTPVLDGTETQRRDVYYAITLPAADYKVSVEFQRVDRKDSNVGGFVSALSEDGDHKTDQVVRVNTIGPTANVAAKLSLADEAKVIFRTRADFAKETAVFSVENWTE*