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PLM2_30_b1_sep16_scaffold_2654_2

Organism: PLM2_30_b1_sep16_Chthoniobacter_flavus_55_13

partial RP 38 / 55 MC: 1 BSCG 39 / 51 ASCG 11 / 38
Location: comp(742..1233)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Chthoniobacter flavus Ellin428 RepID=B4CU29_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 50.3
  • Coverage: 161.0
  • Bit_score: 141
  • Evalue 5.70e-31
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 49.1
  • Coverage: 163.0
  • Bit_score: 138
  • Evalue 1.10e-30
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 47.3
  • Coverage: 167.0
  • Bit_score: 143
  • Evalue 1.60e-31

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Taxonomy

RLO_Verrucomicrobia_64_8 → Opitutae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 492
ATGGAGAATATCGCCAGCCATGAGGATTGGAAGAGTTGTTTTTCTGAACTCGCGCCCGGCTTGCTGCTTTTCGCCAGGCAATGGGTGCGGTCGCGCGCTGACGCGGAAGACATCGTTCAGGAAGCATTCGTCAAATTTTGGCGACGCAATCACAAGATCGATAATCGCGGCTTGCTTTACGCGACCGTGCGTTCGATCGCGCTGGATCGTATTCGCCGTGACAGTCGCCGTACACGACGCGAAGCGGAAGCTGTTTCAGAATTGGAACAAGTGGTCGAGCCGCAGTTTGAATTGGTGGATGAAACGCAGTTTGCGCTCGCTGCAGCGGTGGAACGCTTGCCGCACGAACAACGCGAAGTGCTGGTTATGAAGATTTGGAACGAGCTTACTTTCGCAGAAATCGCCTATGCGATCGGTATTTCGCAAAACACGGCTGCATCGCGTTATCGCTACGCACTGGCAGCGTTGAAAAGAATGTTCCAACCACAATGA
PROTEIN sequence
Length: 164
MENIASHEDWKSCFSELAPGLLLFARQWVRSRADAEDIVQEAFVKFWRRNHKIDNRGLLYATVRSIALDRIRRDSRRTRREAEAVSELEQVVEPQFELVDETQFALAAAVERLPHEQREVLVMKIWNELTFAEIAYAIGISQNTAASRYRYALAALKRMFQPQ*