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PLM2_30_b1_sep16_Chthoniobacter_flavus_55_13

PLM2_30cm_b1_sep2016_Bacteria_55_13
In projects: PLM2_30cm_b1_sep2016  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p

Consensus taxonomy: Bacteria

Displaying items 1-50 of 401 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM2_30_b1_sep16_scaffold_31955
Species: RHI_Verrucumicrobia_41_10 (50%)
2 2500 bp 54.96 8.40 96.24
PLM2_30_b1_sep16_scaffold_31872
Domain: Bacteria (66.67%)
3 2503 bp 54.25 11.27 87.73
PLM2_30_b1_sep16_scaffold_31898
Domain: Bacteria (80%)
5 2503 bp 53.62 12.82 87.38
PLM2_30_b1_sep16_scaffold_31825
Species: Chthoniobacter flavus (100%)
2 2505 bp 55.45 11.20 96.77
PLM2_30_b1_sep16_scaffold_31836
Species: Chthoniobacter flavus (50%)
4 2505 bp 52.53 12.75 95.69
PLM2_30_b1_sep16_scaffold_31805
Phylum: Verrucomicrobia (66.67%)
3 2506 bp 55.11 10.89 92.54
PLM2_30_b1_sep16_scaffold_31532
Domain: Bacteria (66.67%)
3 2516 bp 55.25 17.83 99.09
PLM2_30_b1_sep16_scaffold_31537
Species: Pedosphaera parvula (66.67%)
3 2516 bp 53.54 10.49 89.67
PLM2_30_b1_sep16_scaffold_31519
Species: Chthoniobacter flavus (100%)
2 2517 bp 55.46 10.85 82.12
PLM2_30_b1_sep16_scaffold_31186
Domain: Bacteria (50%)
8 2530 bp 52.77 10.97 79.64
PLM2_30_b1_sep16_scaffold_31120
Species: RHI_Verrucumicrobia_41_10 (50%)
2 2532 bp 53.67 11.97 97.51
PLM2_30_b1_sep16_scaffold_31057
Domain: Bacteria (100%)
5 2535 bp 56.73 11.72 92.90
PLM2_30_b1_sep16_scaffold_31017
Domain: Bacteria (66.67%)
3 2536 bp 55.91 9.82 86.59
PLM2_30_b1_sep16_scaffold_30904
Species: Chthoniobacter flavus (75%)
4 2541 bp 55.14 9.45 97.76
PLM2_30_b1_sep16_scaffold_30873
Domain: Bacteria (100%)
3 2542 bp 54.37 10.56 83.20
PLM2_30_b1_sep16_scaffold_30855
Domain: Bacteria (75%)
4 2543 bp 53.95 14.92 85.76
PLM2_30_b1_sep16_scaffold_30816
Domain: Bacteria (75%)
4 2545 bp 54.70 9.67 66.25
PLM2_30_b1_sep16_scaffold_30678
Species: Gloeobacter kilaueensis (50%)
2 2550 bp 53.57 12.24 92.94
PLM2_30_b1_sep16_scaffold_30485
Species: RLO_Verrucomicrobia_64_8 (100%)
3 2559 bp 56.12 5.51 93.32
PLM2_30_b1_sep16_scaffold_30269
Species: Chthoniobacter flavus (50%)
2 2568 bp 55.37 11.57 88.79
PLM2_30_b1_sep16_scaffold_30246
Species: Chthoniobacter flavus (50%)
4 2569 bp 55.24 13.66 97.63
PLM2_30_b1_sep16_scaffold_30219
Species: Chthoniobacter flavus (75%)
4 2571 bp 55.19 10.39 95.33
PLM2_30_b1_sep16_scaffold_30065
Species: RHI_Verrucumicrobia_41_10 (66.67%)
3 2578 bp 53.76 12.68 79.25
PLM2_30_b1_sep16_scaffold_29897
Species: Chthoniobacter flavus (50%)
4 2585 bp 54.66 12.42 89.48
PLM2_30_b1_sep16_scaffold_29849
Class: Verrucomicrobiae (50%)
4 2587 bp 54.04 10.49 85.12
PLM2_30_b1_sep16_scaffold_29741
Domain: Bacteria (50%)
4 2592 bp 54.98 12.79 84.38
PLM2_30_b1_sep16_scaffold_29594
Domain: Bacteria (66.67%)
3 2598 bp 54.81 10.85 61.74
PLM2_30_b1_sep16_scaffold_54895
Domain: Bacteria (66.67%)
3 2606 bp 53.76 12.49 94.05
PLM2_30_b1_sep16_scaffold_29396
Domain: Bacteria (100%)
3 2606 bp 56.06 10.99 81.27
PLM2_30_b1_sep16_scaffold_29419
Phylum: Verrucomicrobia (66.67%)
3 2606 bp 55.45 12.32 82.54
PLM2_30_b1_sep16_scaffold_29136
Species: uncultured bacterium (80%)
5 2619 bp 55.56 10.94 93.36
PLM2_30_b1_sep16_scaffold_29034
Species: Pedosphaera parvula (66.67%)
3 2624 bp 55.26 15.15 94.32
PLM2_30_b1_sep16_scaffold_29047
Species: Pedosphaera parvula (66.67%)
3 2624 bp 55.68 11.43 97.52
PLM2_30_b1_sep16_scaffold_29016
Species: Chthoniobacter flavus (66.67%)
3 2625 bp 54.32 12.91 87.09
PLM2_30_b1_sep16_scaffold_29027
Species: uncultured bacterium (100%)
2 2625 bp 55.96 10.00 99.31
PLM2_30_b1_sep16_scaffold_28932
Domain: Bacteria (60%)
5 2629 bp 53.02 9.87 83.99
PLM2_30_b1_sep16_scaffold_28729
Domain: Bacteria (80%)
5 2639 bp 54.38 10.00 92.88
PLM2_30_b1_sep16_scaffold_28672
Species: Chthoniobacter flavus (50%)
4 2641 bp 52.59 15.62 89.85
PLM2_30_b1_sep16_scaffold_28657
Species: Pyrinomonas methylaliphatogenes (50%)
2 2642 bp 57.61 11.87 74.15
PLM2_30_b1_sep16_scaffold_28381
Species: Chthoniobacter flavus (66.67%)
3 2655 bp 56.16 14.12 93.56
PLM2_30_b1_sep16_scaffold_28272
Species: Chthoniobacter flavus (100%)
4 2661 bp 55.69 12.51 97.41
PLM2_30_b1_sep16_scaffold_27973
Domain: Bacteria (66.67%)
3 2676 bp 54.56 11.21 84.19
PLM2_30_b1_sep16_scaffold_27876 4 2680 bp 54.03 11.14 90.90
PLM2_30_b1_sep16_scaffold_27893
Species: uncultured bacterium (66.67%)
3 2680 bp 55.41 10.80 89.22
PLM2_30_b1_sep16_scaffold_62089
Species: Chthoniobacter flavus (50%)
2 2683 bp 56.28 10.85 87.33
PLM2_30_b1_sep16_scaffold_27325
Domain: Bacteria (60%)
5 2708 bp 55.43 11.91 97.82
PLM2_30_b1_sep16_scaffold_27115
Species: uncultured bacterium (100%)
4 2718 bp 55.45 11.42 90.73
PLM2_30_b1_sep16_scaffold_27084
Domain: Bacteria (66.67%)
3 2720 bp 54.49 13.51 53.82
PLM2_30_b1_sep16_scaffold_27052
Domain: Bacteria (66.67%)
3 2722 bp 55.44 9.86 94.78
PLM2_30_b1_sep16_scaffold_27018
Species: RBG_16_Zixibacteria_50_21_curated (66.67%)
3 2724 bp 52.02 10.52 92.18
Displaying items 1-50 of 401 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.