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PLM4_65_b1_redo_sep16_scaffold_3080_17

Organism: PLM4_65_b1_sep16_Acidobacteria_68_8

near complete RP 42 / 55 BSCG 44 / 51 ASCG 12 / 38 MC: 1
Location: comp(16697..17506)

Top 3 Functional Annotations

Value Algorithm Source
o-antigen export system permease; K09690 lipopolysaccharide transport system permease protein bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 45.1
  • Coverage: 266.0
  • Bit_score: 228
  • Evalue 4.50e-57
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 42.0
  • Coverage: 262.0
  • Bit_score: 184
  • Evalue 2.80e-44
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 45.3
  • Coverage: 265.0
  • Bit_score: 238
  • Evalue 6.10e-60

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Taxonomy

R_Acidobacteria_65_29 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 810
TTGACCTCATCGATCGCCATCGCTACCCGGGTTTTCCGCCATCGCGGGCTCCTGGCTGCGCTCACCCTGCGCGAGCTCAAGGCGCGCTACCGCGGATCGATCCTCGGGTTTTTCTGGTCGCTCGTCCAGCCGCTGCTGCTCCTGGCCGTCTACACCTTCGTCTTCAGCGTCGTCTTCGAGCCGCGCTCGGCGGGGGCCGATCCCTACGCCCTCTTCCTGGTCTGTGGCCTCTTTCCGTGGATCTGGCTGTCGACCGCGCTCGTCGAGGGGACGACCTCGCTGGTCGCGAGCGCCGGCCTCATCCGGCGGGCGGTCTTTCCGGCCGAGCTCCTGCCGCTCGTTCCGGTGCTCGCCAATCTCGTGCACCTGGTTCTGGCGCTGCCCGTCCTCGCGGCGGCACTCGTCCTCGGCCGGTGGCAGGGCTTCGCGGTCGGCGGCTCTGGCGCCCTGGCGCTGCCGGCGATCGTCGCGCTCGAGCTGCCGCTCGTCGGCGGCCTGGCTCTCGCGCTCGCGGCGTTGCACGCGCATTTCAAGGACGTCAAGGATCTGTTGACCAGCGCTCTGACGCTCGCCTTCTTCCTCACCCCGGTTCTCTTCCCGCTCTCCGCGGTCGGCATCCCGGCGCTCCGACGTCTGGTCCAGCTCAATCCCGCGACACCGTTCACTCTCGCCTATCAGGAGGCGCTCTTCAACGGACGGTTCCCGCCGCTCGCGCTCTGGCTCGAGATGTCCGCCGTCGCGCTCGTCGCCTGGCTTGTCGGCTGCTGGATCTTCGAGCGCCTGCGCGAGACCCTGGTGGAGGCGTTGTGA
PROTEIN sequence
Length: 270
LTSSIAIATRVFRHRGLLAALTLRELKARYRGSILGFFWSLVQPLLLLAVYTFVFSVVFEPRSAGADPYALFLVCGLFPWIWLSTALVEGTTSLVASAGLIRRAVFPAELLPLVPVLANLVHLVLALPVLAAALVLGRWQGFAVGGSGALALPAIVALELPLVGGLALALAALHAHFKDVKDLLTSALTLAFFLTPVLFPLSAVGIPALRRLVQLNPATPFTLAYQEALFNGRFPPLALWLEMSAVALVAWLVGCWIFERLRETLVEAL*