ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_24124_4

Organism: PLM4_65_b1_sep16_Acidobacteria_68_8

near complete RP 42 / 55 BSCG 44 / 51 ASCG 12 / 38 MC: 1
Location: comp(1919..3199)

Top 3 Functional Annotations

Value Algorithm Source
trpB; tryptophan synthase subunit beta (EC:4.2.1.20) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 63.0
  • Coverage: 424.0
  • Bit_score: 524
  • Evalue 6.30e-146
tryptophan synthase subunit beta similarity KEGG
DB: KEGG
  • Identity: 66.8
  • Coverage: 389.0
  • Bit_score: 520
  • Evalue 4.40e-145
Tax=CSP1_6_Rokubacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 63.0
  • Coverage: 424.0
  • Bit_score: 524
  • Evalue 8.80e-146

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CSP1_6_Rokubacteria → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1281
GTGCTCGGAGCTAGGAAGAGATCGTCGACCGGCCCCGACGAGCGCGGCCATTTCGGCCCGTTCGGCGGACGCTTCGTACCCGAAACCCTGATGGCGCCGCTCGCCGAGCTGGCGCGCGCTTACGACAAGCTCTCGCGCGACCGCAAGTTCCGCGCCGAGCTCTACGAGCTGCTCAAGAATTACGTCGGTCGGCCAACGCCGCTGACCTTTGCCGACCGGCTGTCGCGCGAGCTGGGCGGGGCGCGCATCTTCCTGAAGCGCGAGGACCTGCTGCACACTGGCGCGCACAAGATCAACAACGCGCTCGGGCAGGCACTGCTGGCGCGGGCGATGAAGAAGAGGCGGGTCATCGCCGAGACCGGCGCCGGCCAGCATGGCGTCGCGACAGCGACCGCGGCGGCGCTTCTCGGTCTCGACTGCGTCGTTTACATGGGCGAGGAAGACATGCGTCGCCAGCATCCGAACGTCGAGCGCATGCGCCTTCTCGGCGCGACAGTGGTGCCCGTCACCGCGGGCGCGAAGACGCTCAAGGATGCGATCAACGAGGCGATGCGCGACTGGGTGACCAACGTGCGCACGACGCACTACATCCTCGGCTCGGTTCTGGGCCCCGATCCGTTTCCGCGCATGGTGCGCGATTTCCATCGCGTGATCGGCGAGGAGGCGAAGCGCCAGATCCGGCAGCGCACGGGCCACAAGGGGCCCGACGCTGCGATCGCCTGTGTCGGCGGCGGCTCGAATGCGCTGGGCCTCTTCACCGCCTTTCTCGAGGATCCGAGCGTCCGGCTGATCGGGGTCGAAGCGGGCGGTCGCGGCAAAGGCTTGGGCGAGCACGCGGCGCGCTTCGCCCGCGACGGCGGTGCCCTCGGCGTGCTCCACGGCACGCGCACGATGGTGCTCCAGGACGCCGACGGCCAGGTGGCGCCGACGCACTCGGTTTCGGCCGGCCTCGACTATCCGGCGGTCGGGCCGGAGCACGCTCTGCTGCGGCAGCTCGGGCGGATCGAATACACCACGGCCACCGACGAGGAGGCGATCGCCGCCTTCCATCGCCTCGCAGAAACCGAGGGCATCCTGCCGGCGCTCGAAAGCGCCCACGCCGTCGCGGAGGCGATGAAGCGCGCTCCCGCTCTCTCGCGCCGCCATGTCCTGTTGGTGAATCTCTCCGGGCGCGGCGACAAAGACCTCGAGTCGGTGAGCACCTGGGACGCCGCGCATCCACCTGAAGCCGCGGGAGCCGCGGCAGCCGCGGCTCCCGGGAACCCGCGGAGGACGCGATGA
PROTEIN sequence
Length: 427
VLGARKRSSTGPDERGHFGPFGGRFVPETLMAPLAELARAYDKLSRDRKFRAELYELLKNYVGRPTPLTFADRLSRELGGARIFLKREDLLHTGAHKINNALGQALLARAMKKRRVIAETGAGQHGVATATAAALLGLDCVVYMGEEDMRRQHPNVERMRLLGATVVPVTAGAKTLKDAINEAMRDWVTNVRTTHYILGSVLGPDPFPRMVRDFHRVIGEEAKRQIRQRTGHKGPDAAIACVGGGSNALGLFTAFLEDPSVRLIGVEAGGRGKGLGEHAARFARDGGALGVLHGTRTMVLQDADGQVAPTHSVSAGLDYPAVGPEHALLRQLGRIEYTTATDEEAIAAFHRLAETEGILPALESAHAVAEAMKRAPALSRRHVLLVNLSGRGDKDLESVSTWDAAHPPEAAGAAAAAAPGNPRRTR*