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PLM3-1_170_b1_sep16_scaffold_3704

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_3704_1
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(1..2082)
DNA (2082bp) protein (694aa)
atm:ANT_10450 putative NADH-quinone oxidoreductase subunit L; K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
putative NADH-quinone oxidoreductase subunit L
Tax=RBG_13_Chloroflexi_68_17_curated
PLM3-1_170_b1_sep16_scaffold_3704_2
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(2190..2498)
DNA (309bp) protein (103aa)
NADH-quinone oxidoreductase subunit K 2 Tax=uncultured Chloroflexi bacterium RepID=H5SA71_9CHLR bin=RBG9 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
NADH-ubiquinone oxidoreductase chain 4L
Tax=RBG_13_Chloroflexi_68_17_curated
PLM3-1_170_b1_sep16_scaffold_3704_3
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(2591..3100)
DNA (510bp) protein (170aa)
NADH dehydrogenase I subunit J Tax=uncultured Chloroflexi bacterium RepID=H5SA70_9CHLR bin=RBG9 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
putative NADH-quinone oxidoreductase subunit J
Tax=RBG_13_Chloroflexi_66_10_curated
PLM3-1_170_b1_sep16_scaffold_3704_4
RBG_13_Chloroflexi_48_10_curated, Chloroflexi, Bacteria

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comp(3097..4311)
DNA (1215bp) protein (405aa)
atm:ANT_10420 nuoH; NADH-quinone oxidoreductase subunit H (EC:1.6.99.5); K00337 NADH-quinone oxidoreductase subunit H [EC:1.6.5.3] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
nuoH; NADH-quinone oxidoreductase subunit H (EC:1.6.99.5)
Tax=RBG_13_Chloroflexi_48_10_curated
PLM3-1_170_b1_sep16_scaffold_3704_5
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4375..4731)
DNA (357bp) protein (119aa)
NADH-quinone oxidoreductase subunit A 1 Tax=uncultured Chloroflexi bacterium RepID=H5SA68_9CHLR bin=RBG9 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
NADH-ubiquinone/plastoquinone oxidoreductase subunit 3
Tax=RBG_16_Gammaproteobacteria_66_13_curated
PLM3-1_170_b1_sep16_scaffold_3704_6
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

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4914..5903
DNA (990bp) protein (330aa)
FemAB family protein Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MY56_ANATU
FemAB family protein
Tax=RBG_13_Chloroflexi_66_10_curated
PLM3-1_170_b1_sep16_scaffold_3704_7
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

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5953..7380
DNA (1428bp) protein (476aa)
FemAB family protein Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MY55_ANATU
FemAB family protein
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
PLM3-1_170_b1_sep16_scaffold_3704_8
GWA2_WOR_2_45_18_curated, WOR-2, Bacteria

Not on your lists

comp(7578..8111)
DNA (534bp) protein (178aa)
Putative nucleotidyltransferase bin=GWD1_TM7_39_7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=GWD1_TM7_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D2_39_7
DNA polymerase beta subunit
Tax=GWA2_WOR_2_45_18_curated
PLM3-1_170_b1_sep16_scaffold_3704_9
CG_Anaero_01, Anaerolineae, Chloroflexi, Bacteria

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8181..9164
DNA (984bp) protein (328aa)
atm:ANT_22590 pyridoxal-phosphate dependent protein; K05396 D-cysteine desulfhydrase [EC:4.4.1.15] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
pyridoxal-phosphate dependent protein
Tax=CG_Anaero_01
PLM3-1_170_b1_sep16_scaffold_3704_10
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(9175..11166)
DNA (1992bp) protein (664aa)
Transglutaminase domain protein Tax=Bacteria RepID=H1A8L6_9BACT
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_3704_11
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

comp(11707..12597)
DNA (891bp) protein (297aa)
Phosphonate transport system substrate-binding protein Tax=uncultured prokaryote RepID=H5SKL6_9ZZZZ bin=RBG9 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG9 organism_group=Chloroflexi
phosphonates-binding protein
Tax=RBG_16_Chloroflexi_54_18_curated
PLM3-1_170_b1_sep16_scaffold_3704_12
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(12594..13496)
DNA (903bp) protein (301aa)
Amino acid ABC transporter substrate binding protein Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N485_ANATU
amino acid ABC transporter substrate-binding protein
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
PLM3-1_170_b1_sep16_scaffold_3704_13
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(13741..14616)
DNA (876bp) protein (292aa)
Putative amino acid ABC transporter permease protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I1I5_CALAS
amino acid ABC transporter permease
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
PLM3-1_170_b1_sep16_scaffold_3704_14
unknown

Not on your lists

comp(14816..15091)
DNA (276bp) protein (92aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_3704_15
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

15328..15957
DNA (630bp) protein (210aa)
putative aminopeptidase (EC:3.4.11.-)
Putative aminopeptidase bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
PLM3-1_170_b1_sep16_scaffold_3704_16
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

15941..16447
DNA (507bp) protein (169aa)
putative aminopeptidase (EC:3.4.11.-)
Putative aminopeptidase bin=GWC2_Chloroflexi_49_37 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
PLM3-1_170_b1_sep16_scaffold_3704_17
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

16450..17535
DNA (1086bp) protein (362aa)
putative aminopeptidase (EC:3.4.11.-)
Putative aminopeptidase Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N1I2_ANATU
Tax=RBG_16_Chloroflexi_57_11_curated
PLM3-1_170_b1_sep16_scaffold_3704_18

Not on your lists

17634..17930
DNA (297bp) protein (99aa)
Marine sediment metagenome DNA, contig: S01H1_S05915 {ECO:0000313|EMBL:GAG10255.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM3-1_170_b1_sep16_scaffold_3704_19
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

17931..18926
DNA (996bp) protein (332aa)
putative aminopeptidase (EC:3.4.11.-)
Putative aminopeptidase Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N1I3_ANATU
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_3704_20
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(18955..19704)
DNA (750bp) protein (250aa)
Glycosyl transferase Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DJB7_SINAD
glycosyl transferase family protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_3704_21
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(19785..20348)
DNA (564bp) protein (188aa)
phosphoheptose isomerase Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B75529
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_3704_22
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(20376..21740)
DNA (1365bp) protein (455aa)
UDP-phosphate galactose phosphotransferase (EC:2.7.8.6)
putative glycosyltransferase bin=RBG_19FT_COMBO_GAL15_69_19 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
Tax=RBG_16_Chloroflexi_56_8_curated
PLM3-1_170_b1_sep16_scaffold_3704_23
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(21737..22816)
DNA (1080bp) protein (360aa)
GHMP kinase; K07031 D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168] bin=RBG_19FT_COMBO_GAL15_69_19 species=Desulfovibrio fructosivorans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
GHMP kinase
Tax=RBG_16_Chloroflexi_56_8_curated
PLM3-1_170_b1_sep16_scaffold_3704_24
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(22816..23436)
DNA (621bp) protein (207aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI000367471B
NAD-dependent epimerase/dehydratase family protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_3704_25
unknown

Not on your lists

23609..23869
DNA (261bp) protein (87aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_3704_26
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

24028..24585
DNA (558bp) protein (186aa)
gmhB; D,D-heptose 1,7-bisphosphate phosphatase (EC:3.1.3.-)
D,D-heptose 1,7-bisphosphate phosphatase Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MXE5_ANATU
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_3704_27
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

24920..26068
DNA (1149bp) protein (383aa)
Putative Dolichol-P-glucose synthetase Tax=Nitrolancetus hollandicus Lb RepID=I4EDW6_9CHLR
family 2 glycosyl transferase
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_3704_28
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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26195..26809
DNA (615bp) protein (205aa)
Glycosyl transferase family 2 Tax=halophilic archaeon DL31 RepID=G2MQ61_9ARCH bin=RBG2 species=halophilic archaeon DL31 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG2 organism_group=Chloroflexi
family 2 glycosyl transferase
Tax=RBG_16_Chloroflexi_63_12_curated
Displaying 28 items

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