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PLM4_65_coex_sep16_Deltaproteobacteria_Geobacteraceae_55_13

PLM4_65cm_coex_sep2016_Geobacter_uraniireducens_55_13
In projects: PLM4_65cm_coex_sep2016  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p

Consensus taxonomy: Geobacter uraniireducens  →  Geobacter  →  Desulfuromonadales  →  Deltaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 51-100 of 694 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM4_65_coex_sep16_scaffold_24218
Species: Geobacter uraniireducens (66.67%)
3 3108 bp 54.60 16.41 87.16
PLM4_65_coex_sep16_scaffold_28873
Species: Geobacter uraniireducens (100%)
3 2807 bp 56.50 16.41 81.76
PLM4_65_coex_sep16_scaffold_1020
Species: Geobacter uraniireducens (65.22%)
23 18597 bp 54.61 16.38 88.87
PLM4_65_coex_sep16_scaffold_1545
Species: Geobacter sp. M18 (58.33%)
12 15194 bp 51.47 16.36 86.38
PLM4_65_coex_sep16_scaffold_23617
Species: Geobacter uraniireducens (100%)
4 3155 bp 58.48 16.31 89.29
PLM4_65_coex_sep16_scaffold_20013
Species: Geobacter uraniireducens (100%)
3 3471 bp 60.27 16.25 97.41
PLM4_65_coex_sep16_scaffold_9965
Species: Geobacter uraniireducens (100%)
3 5217 bp 59.98 16.22 98.45
PLM4_65_coex_sep16_scaffold_851
Class: Deltaproteobacteria (83.33%)
30 20451 bp 54.24 16.21 79.01
PLM4_65_coex_sep16_scaffold_1484
Species: Geobacter uraniireducens (100%)
14 15129 bp 56.75 16.21 89.57
PLM4_65_coex_sep16_scaffold_6707
Order: Desulfuromonadales (55.56%)
9 6556 bp 52.21 16.11 91.05
PLM4_65_coex_sep16_scaffold_1597
Genus: Geobacter (66.67%)
15 18554 bp 57.65 16.09 89.33
PLM4_65_coex_sep16_scaffold_13565
Species: Geobacter daltonii (50%)
6 5848 bp 57.69 16.08 81.77
PLM4_65_coex_sep16_scaffold_24832
Species: Geobacter uraniireducens (100%)
2 3062 bp 54.64 16.07 75.24
PLM4_65_coex_sep16_scaffold_28701
Species: Geobacter uraniireducens (66.67%)
3 2817 bp 51.01 16.03 75.83
PLM4_65_coex_sep16_scaffold_33067
Species: Geobacter uraniireducens (75%)
4 2596 bp 53.27 16.01 82.16
PLM4_65_coex_sep16_scaffold_1672
Species: Geobacter uraniireducens (80.95%)
21 22943 bp 54.59 16.00 84.34
PLM4_65_coex_sep16_scaffold_14061
Species: Geobacter uraniireducens (75%)
8 5159 bp 52.03 15.99 82.63
PLM4_65_coex_sep16_scaffold_44275
Species: Geobacter uraniireducens (100%)
4 3699 bp 58.83 15.98 94.57
PLM4_65_coex_sep16_scaffold_8018
Species: Geobacter uraniireducens (85.71%)
7 7956 bp 57.91 15.91 91.03
PLM4_65_coex_sep16_scaffold_73087
Species: Geobacter uraniireducens (50%)
4 2531 bp 57.25 15.88 83.33
PLM4_65_coex_sep16_scaffold_5594
Species: Geobacter uraniireducens (100%)
5 7271 bp 57.60 15.86 92.46
PLM4_65_coex_sep16_scaffold_9967
Species: Geobacter uraniireducens (100%)
5 5216 bp 55.77 15.85 89.67
PLM4_65_coex_sep16_scaffold_13490
Species: Geobacter uraniireducens (66.67%)
6 4366 bp 55.96 15.84 82.87
PLM4_65_coex_sep16_scaffold_21342
Species: Geobacter uraniireducens (100%)
4 3344 bp 51.64 15.83 77.42
PLM4_65_coex_sep16_scaffold_2730
Species: Geobacter uraniireducens (54.55%)
11 10854 bp 49.12 15.82 66.01
PLM4_65_coex_sep16_scaffold_4970
Species: Geobacter uraniireducens (85.71%)
7 7789 bp 52.86 15.81 90.63
PLM4_65_coex_sep16_scaffold_22509
Species: Geobacter uraniireducens (100%)
5 5803 bp 62.31 15.79 93.11
PLM4_65_coex_sep16_scaffold_13881
Species: Geobacter uraniireducens (100%)
6 5374 bp 54.95 15.77 98.47
PLM4_65_coex_sep16_scaffold_5105
Species: Geobacter uraniireducens (53.33%)
15 13159 bp 57.22 15.74 89.03
PLM4_65_coex_sep16_scaffold_34395
Species: Geobacter uraniireducens (100%)
2 2537 bp 56.48 15.73 91.29
PLM4_65_coex_sep16_scaffold_17179
Species: Geobacter uraniireducens (80%)
5 3796 bp 56.45 15.73 86.85
PLM4_65_coex_sep16_scaffold_2407
Species: Geobacter uraniireducens (73.33%)
15 14329 bp 55.80 15.69 89.80
PLM4_65_coex_sep16_scaffold_8764
Species: Geobacter uraniireducens (50%)
4 5623 bp 58.55 15.69 87.50
PLM4_65_coex_sep16_scaffold_4021
Species: Geobacter uraniireducens (50%)
12 8787 bp 54.26 15.69 93.58
PLM4_65_coex_sep16_scaffold_5418
Species: Geobacter uraniireducens (100%)
7 7405 bp 57.33 15.64 91.64
PLM4_65_coex_sep16_scaffold_5191
Species: Geobacter uraniireducens (100%)
11 9842 bp 52.42 15.64 95.68
PLM4_65_coex_sep16_scaffold_7604
Species: Geobacter uraniireducens (58.33%)
12 7446 bp 52.16 15.63 82.15
PLM4_65_coex_sep16_scaffold_9540
Class: Deltaproteobacteria (100%)
5 6619 bp 56.25 15.59 78.82
PLM4_65_coex_sep16_scaffold_9381
Species: Geobacter uraniireducens (100%)
6 5409 bp 61.18 15.59 97.95
PLM4_65_coex_sep16_scaffold_14124
Species: Geobacter uraniireducens (75%)
4 4245 bp 51.94 15.58 83.60
PLM4_65_coex_sep16_scaffold_4208
Species: Geobacter uraniireducens (50%)
6 8562 bp 50.44 15.57 96.11
PLM4_65_coex_sep16_scaffold_39943
Genus: Geobacter (60%)
5 3393 bp 50.40 15.56 95.93
PLM4_65_coex_sep16_scaffold_474
Species: Geobacter uraniireducens (60.71%)
28 28140 bp 59.04 15.45 91.59
PLM4_65_coex_sep16_scaffold_4529
Species: Geobacter uraniireducens (72.73%)
11 9753 bp 56.78 15.43 88.59
PLM4_65_coex_sep16_scaffold_29404
Species: Geobacter uraniireducens (77.78%)
9 4743 bp 53.87 15.43 81.28
PLM4_65_coex_sep16_scaffold_3551
Species: Geobacter uraniireducens (50%)
14 12469 bp 55.29 15.42 88.76
PLM4_65_coex_sep16_scaffold_17727
Species: Geobacter uraniireducens (66.67%)
6 6355 bp 56.25 15.41 79.21
PLM4_65_coex_sep16_scaffold_10961
Class: Deltaproteobacteria (85.71%)
7 4944 bp 52.83 15.41 78.48
PLM4_65_coex_sep16_scaffold_80589
Species: Geobacter uraniireducens (66.67%)
3 2719 bp 56.68 15.39 95.88
PLM4_65_coex_sep16_scaffold_28299
Species: Geobacter uraniireducens (100%)
3 2839 bp 56.01 15.38 83.16
Displaying items 51-100 of 694 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.