ggKbase home page

PLM1_60_coex_sep16_scaffold_9763_5

Organism: PLM1_60_coex_sep16_Tectomicrobia_59_6

near complete RP 42 / 55 MC: 1 BSCG 43 / 51 ASCG 12 / 38
Location: 2706..3881

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein Tax=Halomonas sp. KM-1 RepID=UPI000287E20B similarity UNIREF
DB: UNIREF100
  • Identity: 48.5
  • Coverage: 388.0
  • Bit_score: 397
  • Evalue 1.10e-107
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETR76733.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.0
  • Coverage: 396.0
  • Bit_score: 421
  • Evalue 1.30e-114
family 5 extracellular solute-binding protein similarity KEGG
DB: KEGG
  • Identity: 48.1
  • Coverage: 391.0
  • Bit_score: 393
  • Evalue 5.70e-107

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia sp. P52-10 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1176
GTGATCAAAGGCTGGCAGAAGATCGACGACCATACCGTCGAATTTACCACGACACGTCCATCCAGCTTCGTTCCATACCAGGTCATCTACGTGCTATATGCCAGCCCGACCCAATGGGAGAAGGTCGGGAGGAGTTGGCAGGCGCTCGCCCATCACCCAGCGGGCACTGGTCCCTTCAAGCTGGCTCGACTGGTGCCACGCGAACGTGTGGAGCTGGAACGGAACCAGGATTATTGGGACCAGCGGCGCGTTCCCAGGACTGAAAGAGTCGTGCTGCTACCGATGCCCGAGGCGACCACGCGCCTGGCAGCACTCCGGACTGGCCAGGTAGATTGGATCGAGGTACCGCCGCCGGATGCCATTCCGACGTTACGACAGGCAGGTTTTCACATCAGCCTGCGACCCTACCCGCACAACTGGACCCACACTCTGAATCTGCGCCATCCCTCCTGGGACAATAAGCTCGTGCGGCAAGCTGCGAACTATGCCATCGACCGTGAGGGGATCTGTCGGTCCCTGCTTAACGGGACGTGCATTCCCGCCATCGGCGAGGTGTATCCTGGCCATCCGTGGTTTGGCAAACCGAACGTTCGCTATGAATATAACCCGGCGAAGGCCAAACAGTTACTGCAGCAGGCTGGCTATGACGGGAAAACCAAGCGGGTAAAGGCCAGCGTGCTGATCTCGACGACCGGCTCTGGTCAGATGCTGCCCCTACCGATGAACGAGTTCGTCCAGGAGAATCTGCGCGAGGTTGGGATCGACCTCGACATCATCCCCATCGAGTGGAACGCCCTCACGCAGCGCGGGCGTCAGGGCTTTCAGCATCCCGATAATGCACAGTTAGGGGCGATGAACATCTCGTACAATTTCCAGGAGCCTCAGAGCGCCTTCGTGCGGTTCTTCCACAGTACTTCACTCCCACCGGCCGGGGCGAACCGCATGCCCTATCTGAACCCGGAAGTGGACCGTCTCATCGAGGCCGCAGAGCAGGAGTTCGATCTGGGGAAACAGCATCAACTCCTGGCGCAGGTCCACGAGACCATCGTCGAAGATGCCCCGTGGGTGTTTATTGTGCACGATCTGAATCCCCGCGCTCTGAGCCCGAAGGTAAAAGGCTTTGTGCAGCCGCAATCCTGGTTCGTCGATCTGACGTTGCCATGGGTCGAGAAGTAG
PROTEIN sequence
Length: 392
VIKGWQKIDDHTVEFTTTRPSSFVPYQVIYVLYASPTQWEKVGRSWQALAHHPAGTGPFKLARLVPRERVELERNQDYWDQRRVPRTERVVLLPMPEATTRLAALRTGQVDWIEVPPPDAIPTLRQAGFHISLRPYPHNWTHTLNLRHPSWDNKLVRQAANYAIDREGICRSLLNGTCIPAIGEVYPGHPWFGKPNVRYEYNPAKAKQLLQQAGYDGKTKRVKASVLISTTGSGQMLPLPMNEFVQENLREVGIDLDIIPIEWNALTQRGRQGFQHPDNAQLGAMNISYNFQEPQSAFVRFFHSTSLPPAGANRMPYLNPEVDRLIEAAEQEFDLGKQHQLLAQVHETIVEDAPWVFIVHDLNPRALSPKVKGFVQPQSWFVDLTLPWVEK*