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PLM3_127_b2_sep16_Rokubacteria_68_9

PLM3_127cm_b2_sep2016_Rokubacteria_68_9
In projects: PLM3_127cm_b2_sep2016  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p  |  rokubacteria_ggkbase

Consensus taxonomy: Rokubacteria  →  Bacteria

Displaying items 551-600 of 674 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM3_127_b2_sep16_scaffold_14214
Species: GWA2_Rokubacteria_70_23_curated (80%)
5 6126 bp 71.43 9.04 97.31
PLM3_127_b2_sep16_scaffold_39883
Species: GWC2_Rokubacteria_70_16_curated (100%)
2 2571 bp 68.18 10.85 97.32
PLM3_127_b2_sep16_scaffold_8813
Phylum: Rokubacteria (50%)
8 6905 bp 68.23 6.69 97.32
PLM3_127_b2_sep16_scaffold_10820
Domain: Bacteria (100%)
11 12012 bp 67.63 5.21 97.33
PLM3_127_b2_sep16_scaffold_103672
Species: GWA2_Rokubacteria_70_23_curated (100%)
3 2583 bp 64.19 9.93 97.33
PLM3_127_b2_sep16_scaffold_100181
Phylum: Rokubacteria (66.67%)
3 2586 bp 71.42 7.42 97.33
PLM3_127_b2_sep16_scaffold_31632
Phylum: Proteobacteria (100%)
3 3462 bp 69.44 7.50 97.40
PLM3_127_b2_sep16_scaffold_28646
Species: GWC2_Rokubacteria_70_16_curated (66.67%)
3 3119 bp 67.36 10.72 97.44
PLM3_127_b2_sep16_scaffold_4616
Species: GWC2_Rokubacteria_70_16_curated (60%)
10 10000 bp 70.65 9.00 97.44
PLM3_127_b2_sep16_scaffold_32807
Species: GWA2_Rokubacteria_70_23_curated (60%)
5 2881 bp 68.90 7.29 97.47
PLM3_127_b2_sep16_scaffold_56837
Species: GWA2_Rokubacteria_70_23_curated (50%)
4 3210 bp 67.13 9.58 97.48
PLM3_127_b2_sep16_scaffold_15021
Species: GWC2_Rokubacteria_70_16_curated (80%)
5 4523 bp 71.19 6.73 97.50
PLM3_127_b2_sep16_scaffold_22193
Species: GWA2_Rokubacteria_70_23_curated (50%)
8 4039 bp 70.34 9.54 97.52
PLM3_127_b2_sep16_scaffold_31107
Species: GWC2_Rokubacteria_70_16_curated (50%)
6 2974 bp 67.45 12.05 97.55
PLM3_127_b2_sep16_scaffold_35904
Domain: Bacteria (90%)
10 7011 bp 70.05 5.56 97.56
PLM3_127_b2_sep16_scaffold_25905
Species: GWC2_Rokubacteria_70_16_curated (50%)
4 3305 bp 69.95 8.08 97.58
PLM3_127_b2_sep16_scaffold_23195
Species: GWC2_Rokubacteria_70_16_curated (80%)
5 3520 bp 66.82 8.18 97.59
PLM3_127_b2_sep16_scaffold_39032
Phylum: Proteobacteria (50%)
6 2603 bp 70.11 9.68 97.62
PLM3_127_b2_sep16_scaffold_79801
Domain: Bacteria (60%)
5 2648 bp 70.32 7.02 97.66
PLM3_127_b2_sep16_scaffold_72118
Phylum: Rokubacteria (100%)
3 3188 bp 68.91 8.52 97.68
PLM3_127_b2_sep16_scaffold_41314
Species: GWA2_Rokubacteria_70_23_curated (100%)
3 2518 bp 70.97 5.84 97.70
PLM3_127_b2_sep16_scaffold_19934
Phylum: Rokubacteria (60%)
5 3841 bp 71.08 9.68 97.71
PLM3_127_b2_sep16_scaffold_34359
Phylum: Rokubacteria (50%)
4 2803 bp 72.60 5.57 97.72
PLM3_127_b2_sep16_scaffold_30161
Phylum: Rokubacteria (80%)
5 3030 bp 70.66 6.14 97.72
PLM3_127_b2_sep16_scaffold_20051
Phylum: Rokubacteria (71.43%)
7 3828 bp 68.13 8.42 97.81
PLM3_127_b2_sep16_scaffold_37949
Phylum: Rokubacteria (50%)
4 2647 bp 70.76 10.37 97.81
PLM3_127_b2_sep16_scaffold_31551
Species: GWA2_Rokubacteria_70_23_curated (50%)
6 5576 bp 73.10 8.18 97.81
PLM3_127_b2_sep16_scaffold_16677
Species: GWA2_Rokubacteria_70_23_curated (100%)
5 4259 bp 68.98 9.72 97.84
PLM3_127_b2_sep16_scaffold_12169
Species: GWA2_Rokubacteria_70_23_curated (80%)
5 5723 bp 66.91 9.85 97.87
PLM3_127_b2_sep16_scaffold_10547
Phylum: Rokubacteria (66.67%)
9 6945 bp 67.31 8.68 97.88
PLM3_127_b2_sep16_scaffold_19059
Species: GWC2_Rokubacteria_70_16_curated (100%)
4 3944 bp 65.52 11.30 97.90
PLM3_127_b2_sep16_scaffold_13712
Phylum: Rokubacteria (100%)
3 4765 bp 69.86 11.18 97.90
PLM3_127_b2_sep16_scaffold_36169
Species: R_Rokubacteria_71_18 (100%)
4 2721 bp 68.72 10.25 97.91
PLM3_127_b2_sep16_scaffold_26206
Species: GWA2_Rokubacteria_70_23_curated (75%)
4 3283 bp 67.93 10.19 97.96
PLM3_127_b2_sep16_scaffold_19820
Species: GWA2_Rokubacteria_70_23_curated (50%)
4 3854 bp 70.13 8.25 98.00
PLM3_127_b2_sep16_scaffold_68123
Species: GWC2_Rokubacteria_70_16_curated (50%)
4 3081 bp 69.20 5.60 98.05
PLM3_127_b2_sep16_scaffold_14339
Species: GWA2_Rokubacteria_70_23_curated (66.67%)
6 4647 bp 69.87 8.17 98.06
PLM3_127_b2_sep16_scaffold_5988
Domain: Bacteria (90.91%)
11 9049 bp 68.68 9.23 98.10
PLM3_127_b2_sep16_scaffold_12747
Phylum: Rokubacteria (50%)
8 4969 bp 69.25 7.46 98.11
PLM3_127_b2_sep16_scaffold_28420
Species: GWC2_Rokubacteria_70_16_curated (100%)
3 3133 bp 72.68 6.89 98.24
PLM3_127_b2_sep16_scaffold_40033
Species: GWC2_Rokubacteria_70_16_curated (100%)
2 2565 bp 70.53 7.60 98.25
PLM3_127_b2_sep16_scaffold_15295
Domain: Bacteria (100%)
7 6651 bp 71.15 8.98 98.33
PLM3_127_b2_sep16_scaffold_29529
Species: GWC2_Rokubacteria_70_16_curated (62.5%)
8 5577 bp 71.27 7.99 98.33
PLM3_127_b2_sep16_scaffold_95142
Phylum: Rokubacteria (66.67%)
3 2825 bp 68.11 8.28 98.34
PLM3_127_b2_sep16_scaffold_74638
Species: GWA2_Rokubacteria_70_23_curated (80%)
5 3011 bp 69.55 9.07 98.34
PLM3_127_b2_sep16_scaffold_6170
Species: GWC2_Rokubacteria_70_16_curated (66.67%)
9 9430 bp 69.14 9.11 98.37
PLM3_127_b2_sep16_scaffold_54497
Species: GWA2_Rokubacteria_70_23_curated (100%)
3 2795 bp 67.66 9.55 98.43
PLM3_127_b2_sep16_scaffold_32883
Species: CSP1_6_Rokubacteria (66.67%)
3 2877 bp 68.89 10.32 98.44
PLM3_127_b2_sep16_scaffold_20393
Phylum: Proteobacteria (60%)
5 3791 bp 68.19 5.97 98.44
PLM3_127_b2_sep16_scaffold_26026
Species: GWC2_Rokubacteria_70_16_curated (50%)
6 5745 bp 70.79 8.90 98.49
Displaying items 551-600 of 674 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.