ggKbase home page

PLM1_100_b1_sep16_scaffold_3192_5

Organism: PLM1_100_b1_sep16_Deltaproteobacteria_55_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(3484..4404)

Top 3 Functional Annotations

Value Algorithm Source
agmatine deiminase (EC:3.5.3.12) similarity KEGG
DB: KEGG
  • Identity: 54.2
  • Coverage: 301.0
  • Bit_score: 324
  • Evalue 1.90e-86
Agmatine deiminase Tax=Roseiflexus sp. (strain RS-1) RepID=A5UWW1_ROSS1 similarity UNIREF
DB: UNIREF100
  • Identity: 54.2
  • Coverage: 301.0
  • Bit_score: 324
  • Evalue 6.90e-86
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 67.6
  • Coverage: 299.0
  • Bit_score: 408
  • Evalue 6.60e-111

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_60_16 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 921
ATGATCTCGGCGCTATCGCCTTATGAGCAGGTTAATCTTTTAGTCAACGACGAAATAACCGAACGTGAAGTCGCCGCTCGACTCAAACAAGCCGACGCTCTTATGACCAACGTCACGCTGCTTAAGATTCCCACCGTCGATGTTTGGATGCGGGATTACGGCCCGACCTTCGTGACCCGGGAATCTCGCGAGCAGCCGCTCGCCGTCAATGACTGGATCTTCAACGGTTGGGGTGGGAAGTACTACGCTTTCGAGGAAGATGACGGGGTTGCGCGGGAAATCGCCGCGAGGCTCGATGTTCCAGTCTTCGATCACGACATAATTCTTGAAGGCGGTTCGATCGAAGTCAACGGCGCGGGGATTTGCCTGACCACCGAGCAGTGCTTGCTGAACAAAAATCGCAATGCGCATTTGAGCCGGGCCGAGATCGAGCAATATCTCAAAAACTCGCTCGGCGTCGATCAGGTAATTTGGCTTGGCGAGGGGATTGTCGGCGACGACACCGACGGCCACATCGACGATATCGCGCGCTTTGTCAATCCGACCACGGTGGCGTGTATCGTCGAGGCGAATTCAACGGACGAGAATTACATCTATTTGCAAGAAAACTACGAACGGCTACAGAGCGCTACGGATCGCAACGGCAATAAACTTTCAATTGTGACGTTGCCTTGTCCCCGGCCGCTCTACTACGAAGGCTCGCGTTTGCCGGCGAGCTACGCCAATTTCTATATTGCCAACCAGGTCGTGCTGGTTCCCGTGTTCGATGATCCCAACGATGGCAAGGCGCTGGGAATCTTGCAGGAAGTTTTCACCGATCGTAAAGTCATCGGCTTGCGCTGCAATGAAGTCGTCGCGGGTTTAGGCGCGATTCACTGTGTGACGCAACAGCAGCCCGCGGTGAGCACTCGCAGGCCTTGA
PROTEIN sequence
Length: 307
MISALSPYEQVNLLVNDEITEREVAARLKQADALMTNVTLLKIPTVDVWMRDYGPTFVTRESREQPLAVNDWIFNGWGGKYYAFEEDDGVAREIAARLDVPVFDHDIILEGGSIEVNGAGICLTTEQCLLNKNRNAHLSRAEIEQYLKNSLGVDQVIWLGEGIVGDDTDGHIDDIARFVNPTTVACIVEANSTDENYIYLQENYERLQSATDRNGNKLSIVTLPCPRPLYYEGSRLPASYANFYIANQVVLVPVFDDPNDGKALGILQEVFTDRKVIGLRCNEVVAGLGAIHCVTQQQPAVSTRRP*