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PLM1_100_b1_sep16_scaffold_4413_2

Organism: PLM1_100_b1_sep16_Deltaproteobacteria_55_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(1012..1530)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 45.0
  • Coverage: 169.0
  • Bit_score: 135
  • Evalue 4.30e-29
RNA polymerase sigma factor RpoE1 similarity KEGG
DB: KEGG
  • Identity: 44.2
  • Coverage: 165.0
  • Bit_score: 134
  • Evalue 2.10e-29
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 60.6
  • Coverage: 165.0
  • Bit_score: 215
  • Evalue 3.50e-53

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Taxonomy

RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 519
ATGAATCACCTCGATCACTTGTACCGCGTCGCCTTTTATTTGACTAAGAACGAGGAAGACGCTCAAGATTGTGTACAGGAAACTTGTACGCGGGCGCTCGGGGCAAGTGCGCAATTCACATCAGGAACGAACCTAAAGGCGTGGCTGACACGCATTCTCTACAATTTTTTCTTCGACGCGTATGCACGCGGCAAACGAATGATCGCCGTCGATGATATCGCCAATACGGCGGAGCATAAGAAGAATTTCTGGGACACGCTGCCGTCCAATCATCCGGGGCCGGAAACGCGGCTTTTACAGCTGGAGTTGGCTGGGAGGATCAGCGAAGCACTAAAGACGTTACCCGAAGAGTTTCGCGCGCCGATTGTGCTGGTCGATATGGGCGATTTCTCCTATCAAGAAGCGGCGGAGATTCTTGCCTGCCCGATAGGAACCGTCCGTTCACGATTGTCGCGCGGCCGTCGATTGCTGCAGAACCTGCTCAGCGAATATCTGACCAAAGATCCGAGCGAGCGATAA
PROTEIN sequence
Length: 173
MNHLDHLYRVAFYLTKNEEDAQDCVQETCTRALGASAQFTSGTNLKAWLTRILYNFFFDAYARGKRMIAVDDIANTAEHKKNFWDTLPSNHPGPETRLLQLELAGRISEALKTLPEEFRAPIVLVDMGDFSYQEAAEILACPIGTVRSRLSRGRRLLQNLLSEYLTKDPSER*