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PLM1_100_b1_sep16_scaffold_7210_3

Organism: PLM1_100_b1_sep16_Deltaproteobacteria_55_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(1894..2778)

Top 3 Functional Annotations

Value Algorithm Source
RluA family pseudouridine synthase (EC:3.2.1.17); K06179 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome similarity UNIREF
DB: UNIREF100
  • Identity: 40.3
  • Coverage: 298.0
  • Bit_score: 219
  • Evalue 3.90e-54
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 37.8
  • Coverage: 294.0
  • Bit_score: 193
  • Evalue 6.50e-47
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 56.7
  • Coverage: 291.0
  • Bit_score: 349
  • Evalue 4.60e-93

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Taxonomy

RLO_Deltaproteobacteria_60_16 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 885
ATGCGTGAAATTCTTCTCGCGGCTGGTGAAGCGCCGAAAAAGCTTGAGAACTTTCTCAAAAATAAATTCCCGATCGGCTATGTCAGAAAAGTTTTTCGTAAGAACGGGATAAGAGTGAATGGCCAACGGCCCAAGCCGAATGATCTGATACGTGCCGGCGACCGCGTCCAGCTCTACATTCCATTTGAGCAGGAAGCAGAATCTGCAAAGTCACCCAGATCGGGGCGAAAAGTCGATGTCGTTTTTGAAGATGAATCACTGATCATCATCAATAAACCGGCCGGCATCGCGGTGCATGAAGGAAGAACCGTGAGCAAGGGACAGTCGGTGCTAGGAATTCTCGAAAGGCAATACCACGATCGTGGCATAAAGCCTCAACTCGTCCATCGTCTCGACAAAGACACATCGGGTCTTCTATTAGCCGCAAAGAATCCGACGACGGCGAGTGAATTGGAAAGCTCCTTTGAGACCGGCAAGGTTGAGAAGGAATATCTCTGTTTAGTCGTCGGCAGATTACCGAATAACGAAGGCACGATCGACTTGCCACTGCCCGGCCGAGATGGCAAGCCGGTCCGCGCGCTGACCCGATTCCGAGTCGTCAAACGCTTTTCAGAAGTCACGCTCATTCGCGTGGCCATCGAGACCGGCCGACTCCATCAAATCCGCCTTCACTTCGCCAAGCTCGGTCATCCCGTAGTCATGGACGACCAACACGGCGACTTTGGTTTCAACAAACGCTTTCGAAAGGAGTACGGCCTAAAGCGACAGTTTCTCCACGCGGAGAAGTTAGGACTAAACTATGGAACCAAGCAAAGAGAATGGATGGCGGCGCTGGCGAAAGACTTAGAAAAGACCTTGCGCTTGTTGTCCGATCAGAATTCTTAG
PROTEIN sequence
Length: 295
MREILLAAGEAPKKLENFLKNKFPIGYVRKVFRKNGIRVNGQRPKPNDLIRAGDRVQLYIPFEQEAESAKSPRSGRKVDVVFEDESLIIINKPAGIAVHEGRTVSKGQSVLGILERQYHDRGIKPQLVHRLDKDTSGLLLAAKNPTTASELESSFETGKVEKEYLCLVVGRLPNNEGTIDLPLPGRDGKPVRALTRFRVVKRFSEVTLIRVAIETGRLHQIRLHFAKLGHPVVMDDQHGDFGFNKRFRKEYGLKRQFLHAEKLGLNYGTKQREWMAALAKDLEKTLRLLSDQNS*